Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_17021 |
Symbol | psaB |
ID | 4720211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 1499343 |
End bp | 1501571 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640081395 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_001012016 |
Protein GI | 123966935 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAACAA AATTTCCAGC ATTTAACCAG GGTCTAGCTC AGGACCCAAC CACCCGCCGA ATATGGTACG GCATAGCTAC TGCTCATGAC TTTGAGAGTC ATGATGGGAT GACAGAAGAA AAGCTTTACC AAAAGTTGTT TTCTACGCAT TTTGGTCATT TAGCAATTAT TGCTCTTTGG GTAGCTGGTA ATCTATTTCA TATTGCTTGG CAAGGTAATT TTGAGCAATT TGTACTTGAT CCAACCCATG TTCGTCCTAT CGCTCATGCT ATTTGGGACC CTCACTTCGG TTCTGGTATT ACAGAAGCAA TGACTCAGGC AGGAGCCGAT GGCCCAGTAA ATATTGCTTA TTCAGGTTTA TATCATTGGT GGTACACCAT AGGCATGAGA ACAAATGAGC AATTGTTTCA AGCCTCAATA TTTATGAGTA TTTTGGCTTG TTGGACATTG TTTGCTGGAT GGTTACATTT ACAACCAAAA TTTAGACCTT CACTTGCCTG GTTTAAAAAT AACGAATCTA GATTAAATCA TCATCTTGCT GTTTTATTTG GTTTTAGTAG TATTGCTTGG ACAGGACACT TAGTTCACGT TGCTATTCCT GAATCTAGAG GTATTCATGT AGGTTGGGAT AATTGGTTAA CAGTACTACC TCATCCAGCC GGCTTAACTC CTTTCTTTAC ACTTAATTGG GGTGCATATG CCCAGAATCC GGATTCATTA GAACAAGTAT TTGGTACGGC AGAGGGAGCG GGTACAGCAA TATTTACTTT CCTAGGAGGA CTTCATCCTC AAAGTGAAGC ATTATGGTTA ACTGACATAG CTCATCATCA CATTGCAATA GGTACTGTAT TTATAATCGC CGGACATATG TATAGAAATA CTTTTGGAAT CGGACATAGT TTAAAAGAAA TTACAGAAGC GCATAATACA AGACATCCTC TTGATCCTCA CAAAGGAAGT TTTGGGATTA ATCACGATGG TCTTTATGAA ACTGTTACTA ATTCGCTTCA CTTCCAACTT GGTTTAGCTC TAGCAGCTCT TGGAGTAGCC ACATCATTGG TGGCTCAACA TATGGGAGCT CTTCCTTCAT ATGCTTTTAT AGCAAGAGAT TACACTACAC AGTCAGCTTT ATATACTCAT CACCAATATA TAGCGATGTT TTTAATGGTT GGTGCTTTTG CTCATGGTGC AATATTCTTT GTCAGAGATT ATGATCCTGA ATTAAATAAA GATAATGTAT TAGCTCGTGT ACTAGGAACT AAGGAAGCTC TTATTAGTCA TTTAAGCTGG GTGACTATGA TCTTGGGTTT TCATACATTA GGAATATATG TACATAACGA TGTTGTTGTA GCTTTTGGAA ATCCTGAAAA ACAAATTTTA ATCGAACCAG TATTTGCTCA GTTCGTGCAG GCAGCTCAAG GAAAGATGAT GTATGGTTTT AACGCACTGC TTTCTGATCC TACAAGTGCA GCTAGTGTCG CTGCAAATTC TTTACCGGGA AATCATTACT GGATGGATTT GATTAATAGA CAAGATGCTT TAAGTGCTTT TTTACCCATT GGACCAGCAG ATTTCTTGGT TCATCATGCT ATTGCTCTTG GACTTCACAC AACTGCACTA ATTCTAATTA AAGGGGCTTT AGATGCTAGA GGCACTAAGC TTATTCCAGA CAAGAAAGAT TTAGGTTATG CATTCCCATG TGATGGACCA GGGAGAGGAG GTACTTGTGA CAGCTCATCT TGGGACGCCA TGTATCTAGC AATGTTCTGG GCATTAAACT TGATAGCATG GGTAACTTTT TACTGGCATT GGAAACATTT AGCAATTTGG CAAGGTAATG TTGCTCAATT TAATGAGTCT GGAACTTACT TAATGGGTTG GTTTAGAGAT TATCTATGGC TAAACTCAGC TCAATTAATT AATGGATATA ATCCATTCGG CGTTAATTCA CTTTCTGTTT GGGCTTGGAT GTTCTTATTC GGCCATTTAG TATGGGCCAC TGGGTTTATG TTCTTGATCT CATGGCGTGG CTACTGGCAA GAATTAATCG AAACATTAGT TTGGGCCCAC CAGCGTACTC CAATAGCAAA CCTTGTAGGT TGGAGAGATA AACCTGTTGC ACTTTCAATT GTTCAAGCAA GACTAGTGGG ATTAGCTCAT TTCACAATTG GAAATATTCT CACTTTCGGA GCATTTGTAA TAGCTTCTAC TTCAGGTAAG TTTGGATAA
|
Protein sequence | MATKFPAFNQ GLAQDPTTRR IWYGIATAHD FESHDGMTEE KLYQKLFSTH FGHLAIIALW VAGNLFHIAW QGNFEQFVLD PTHVRPIAHA IWDPHFGSGI TEAMTQAGAD GPVNIAYSGL YHWWYTIGMR TNEQLFQASI FMSILACWTL FAGWLHLQPK FRPSLAWFKN NESRLNHHLA VLFGFSSIAW TGHLVHVAIP ESRGIHVGWD NWLTVLPHPA GLTPFFTLNW GAYAQNPDSL EQVFGTAEGA GTAIFTFLGG LHPQSEALWL TDIAHHHIAI GTVFIIAGHM YRNTFGIGHS LKEITEAHNT RHPLDPHKGS FGINHDGLYE TVTNSLHFQL GLALAALGVA TSLVAQHMGA LPSYAFIARD YTTQSALYTH HQYIAMFLMV GAFAHGAIFF VRDYDPELNK DNVLARVLGT KEALISHLSW VTMILGFHTL GIYVHNDVVV AFGNPEKQIL IEPVFAQFVQ AAQGKMMYGF NALLSDPTSA ASVAANSLPG NHYWMDLINR QDALSAFLPI GPADFLVHHA IALGLHTTAL ILIKGALDAR GTKLIPDKKD LGYAFPCDGP GRGGTCDSSS WDAMYLAMFW ALNLIAWVTF YWHWKHLAIW QGNVAQFNES GTYLMGWFRD YLWLNSAQLI NGYNPFGVNS LSVWAWMFLF GHLVWATGFM FLISWRGYWQ ELIETLVWAH QRTPIANLVG WRDKPVALSI VQARLVGLAH FTIGNILTFG AFVIASTSGK FG
|
| |