| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_16871 |
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| Symbol | rpsJ |
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| ID | 4720196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 1483451 |
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| End bp | 1483771 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640081380 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001012001 |
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| Protein GI | 123966920 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAT CACTTGCTCA ACAAAAGATT CGTATAAGAT TAAAAGCATT TGATAGAAGA
ATGCTGGATT TGTCATGTGA CAAAATTATT CAAACAGCAG ATACAACTGC TGCTTCAGCT
ATCGGTCCTA TACCATTACC AACTAAAAGA AAAATTTATT GTGTTCTAAG ATCTCCGCAT
GTGGATAAGG ATTCTAGAGA GCATTTTGAG ACAAGAACTC ATAGAAGAAT TATTGATATC
TATAGCCCCT CTGCCAAAAC CATTGATGCT TTAATGAAAC TAGATCTTCC TAGCGGTGTA
GATATAGAAG TTAAACTATA A
|
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| Protein sequence | MTTSLAQQKI RIRLKAFDRR MLDLSCDKII QTADTTAASA IGPIPLPTKR KIYCVLRSPH
VDKDSREHFE TRTHRRIIDI YSPSAKTIDA LMKLDLPSGV DIEVKL
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