| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_16811 |
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| Symbol | rne |
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| ID | 4720190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 1477999 |
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| End bp | 1479825 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640081374 |
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| Product | ribonuclease E/G |
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| Protein accession | YP_001011995 |
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| Protein GI | 123966914 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGC AAATTATAAT AGCTGAGCAG GCTCGTATTG CAGCACTACT CACGGATGAT
CGAGTTGATG AATTAATCGT CGCACAAGGT CAATATCAAA TCGGGGATAT TTTTTTAGGA
ACTGTTGAAA ATGTTCTACC AGGAATTGAT GCTGCTTTTA TCCATATTGG AGAAAGTGAA
AAAAATGGCT TTATTCATGT ATCAGATCTA GGTCCACTAA GACTGAAAAA AGGTGTTGTA
GGCATCACTG AGCTTCTTGA ACCCAAACAA AAAGTTCTCG TTCAAGTAAT GAAGGAACCT
ACTGGAAATA AAGGGCCCAG ACTAACAGGT AATATTTCAT TACCTGGTAA ATATTTAATA
CTGCAACCTT TCGGACAAGG TGTGAATATT TCTAGGAAGA TAAATACTGA TACTGAAAGA
AGTCGTTTAA GAGCACTTGG AGTCTTAATT AAACCACCTA GCACAGGTCT ATTATTTCGA
ACAGAAGCCG AAAAAATAAA AGAAGAATTA CTTATTGAAG ATCTGGAAAA TTTAATTCAA
CAATGGGATC AAGTTTTAAA AATTTCAGAG ACTTGTCAAC CACCAAATTT AATAAATAGA
GATGAAGATT TTTCATTAAA AATTTTAAGA GACTGTATTA AAGCATCAAC TAGTAAAGTT
GTAATTGATA ATAAAGTAGC TCTCGAAAAA GCAAAAGACT TTTTAATTAA TAATGATTCT
AATGTGGATC TTGTCTTACA TAATAATGAC ATAAATGAAC ATATTCTTGA AAAATATCAA
ATTAATAAAA CTATTCAAAA GGCACTTGAA CCAAGAGTAG ATTTACCCTC AGGTGGATAT
ATCATTATTG AGCCTACTGA AGCTTTAACC GTAATTGATG TGAATTCCGG TTCTTTCACA
AGATCAGCTA ATTCAAGACA AACTGTTTTA TGGACGAATT GCGAAGCAGC TGTTGAAATT
TCTCGACAAA TGAAATTAAG GAATATTGGT GGAGTTTTAG TAATAGACTT TATAGATATG
GAATCTCGAA GAGATCAATT TCAGTTACTT GAGCAGTTTA CTCTAGCCAT AAAAGATGAT
TCTGCAAGAC CTCAGATAGC TGAGTTAACT GAGTTAGGTT TAGTCGAATT AACAAGAAAA
AGGCAAGGTC AAAATATATA TGAATTATTC GGCAAAAAAT GTAATGCTTG CAATGGATTA
GGGCATATAA AAAGTTTACC AAACTATCAA AATTCGAATT CAGAAACAAA TCACTCTGCA
AAAAAATCTA GCAGATTAAA TAATACAAAG TTCACAGATT TAGAGCCATC TGAAGTAATT
GAAAATCAAG AAAAAATTGT CAAGAAAGAG TTACCTAACT CCAAAATTTT AAATAAAGAC
GATGATCCTG CCAAACAAAA AGAAAATGAT AATGAAATAG TTAATACCCA TAATTCAAAA
GAAAAGAAAG TAATAACAGT TGAGCTAAGC GAAGTTGAAA AGATTGTCTA TAGTCAACTT
GGTATTAATC CATTAATTAA ATTAGGAAAA CAATATCTTA CTAATAATCA TTTAGTACGT
TTAGAGAATA GTAATAACAA CGAAAAAGAA CTCTCTTTAC AAAAGAATAA AAAAGCAAAA
ACTAAAGTTT CTAATAAGAA AACAAATAAA AAATCCTCAA CTTCTAATTC AATAGAAAAG
TCTGAAGTTG AAGTAAATGA GTCTAAAGAA ATTAATCATG AGAGCAAATT ACCAAAGATA
ACAACTGCTA ATGAGGAAGT AGAAATAACA GATGAAATTG ATAATTCAAG ACGGAAAAGA
AGAAGATCAT CTGCAAGTAT TGAATAA
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| Protein sequence | MSQQIIIAEQ ARIAALLTDD RVDELIVAQG QYQIGDIFLG TVENVLPGID AAFIHIGESE
KNGFIHVSDL GPLRLKKGVV GITELLEPKQ KVLVQVMKEP TGNKGPRLTG NISLPGKYLI
LQPFGQGVNI SRKINTDTER SRLRALGVLI KPPSTGLLFR TEAEKIKEEL LIEDLENLIQ
QWDQVLKISE TCQPPNLINR DEDFSLKILR DCIKASTSKV VIDNKVALEK AKDFLINNDS
NVDLVLHNND INEHILEKYQ INKTIQKALE PRVDLPSGGY IIIEPTEALT VIDVNSGSFT
RSANSRQTVL WTNCEAAVEI SRQMKLRNIG GVLVIDFIDM ESRRDQFQLL EQFTLAIKDD
SARPQIAELT ELGLVELTRK RQGQNIYELF GKKCNACNGL GHIKSLPNYQ NSNSETNHSA
KKSSRLNNTK FTDLEPSEVI ENQEKIVKKE LPNSKILNKD DDPAKQKEND NEIVNTHNSK
EKKVITVELS EVEKIVYSQL GINPLIKLGK QYLTNNHLVR LENSNNNEKE LSLQKNKKAK
TKVSNKKTNK KSSTSNSIEK SEVEVNESKE INHESKLPKI TTANEEVEIT DEIDNSRRKR
RRSSASIE
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