| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_16171 |
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| Symbol | atpD |
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| ID | 4720491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 1413296 |
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| End bp | 1414756 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640081309 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001011931 |
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| Protein GI | 123966850 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGCAA CTCCATCAAC TTCAGCACCA ACAAAGGGTG TAGTACGTCA AGTAATTGGT
CCAGTTTTGG ATGTAGAATT TCCAGCTGGT AAATTACCAA AAATATTGAA TGCTTTAAGA
ATTGAATCAA AGAACCCAGC AGGTCAGGAC ATAGCGCTCA CTGCAGAGGT CCAACAGCTG
TTAGGAGACC ATAGAGTTAG AGCTGTTGCC ATGAGCGGCA CTGACGGCCT TGTGAGAGGC
ATGGAGGCGA CTGATACAGG TGCTCCTATA TCAGTTCCTG TTGGAGAGGC GACTTTAGGA
AGAATATTTA ATGTATTAGG AGAGCCAGTA GATGAACAAG GTCCAGTAAA AACTTCAGAC
ACTGCTCCAA TCCACAGATC AGCACCTAAA TTAACTGATT TAGAGACTAA GCCTAAAGTT
TTCGAAACAG GAATTAAGGT TATAGACCTA TTAGCTCCCT ACAGACAAGG AGGTAAAGTC
GGTTTGTTTG GAGGTGCTGG CGTAGGTAAA ACAGTATTGA TACAGGAATT AATTAATAAT
ATTGCCAAAG AGCATGGTGG TGTATCAGTG TTTGGAGGGG TTGGGGAAAG AACTAGAGAG
GGAAATGATT TATACGAAGA ATTTAAAGAG TCAGGTGTTA TTAACGCAGA AGATTTATCT
CAATCTAAAG TTGCTTTGTG CTTCGGCCAG ATGAATGAGC CACCAGGTGC CAGGATGAGA
GTTGGCTTAT CAGCATTAAC TATGGCTGAA CATTTTAGAG ATGTAAACAA GCAAGATGTT
CTTCTTTTTG TAGACAATAT TTTTAGATTT GTTCAAGCCG GTTCTGAAGT ATCAGCATTG
CTTGGAAGAA TGCCTTCTGC GGTTGGTTAT CAACCTACTT TAGGAACTGA TGTTGGAGCA
TTACAAGAAA GAATCACTTC AACTTTAGAG GGTTCCATTA CATCAATTCA GGCTGTATAT
GTTCCAGCTG ATGATCTAAC TGACCCAGCT CCTGCTACAA CTTTTGCACA CTTAGATGCC
ACAACCGTTC TAGCAAGAGG TCTTGCTGCA AAGGGTATTT ACCCTGCAGT TGACCCTCTA
GACTCAACAA GCACAATGCT CCAACCATCA GTAGTTGGCG ATGACCATTA TAAAACTGCT
CGTGCAGTTC AATCTACTTT ACAAAGATAT AAAGAGCTCC AAGATATTAT TGCAATTCTT
GGTTTAGATG AATTATCTGA AGAAGACAGA TTAACTGTTA GCAGAGCAAG AAAGATTGAA
AAATTCTTGT CTCAGCCATT CTTCGTAGCA GAAATTTTTA CAGGAATGTC TGGAAAATAT
GTCAAATTAG AAGATACAAT TGCTGGTTTT AATATGATAT TGGCTGGTGA ACTAGATGAT
TTGCCCGAGC AAGCATTTTA CTTGGTGGGT AATATTGAAG AAGTAAAAGC TAAAGCAGAC
AAAATAAATT CAGAAAAATA A
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| Protein sequence | MVATPSTSAP TKGVVRQVIG PVLDVEFPAG KLPKILNALR IESKNPAGQD IALTAEVQQL
LGDHRVRAVA MSGTDGLVRG MEATDTGAPI SVPVGEATLG RIFNVLGEPV DEQGPVKTSD
TAPIHRSAPK LTDLETKPKV FETGIKVIDL LAPYRQGGKV GLFGGAGVGK TVLIQELINN
IAKEHGGVSV FGGVGERTRE GNDLYEEFKE SGVINAEDLS QSKVALCFGQ MNEPPGARMR
VGLSALTMAE HFRDVNKQDV LLFVDNIFRF VQAGSEVSAL LGRMPSAVGY QPTLGTDVGA
LQERITSTLE GSITSIQAVY VPADDLTDPA PATTFAHLDA TTVLARGLAA KGIYPAVDPL
DSTSTMLQPS VVGDDHYKTA RAVQSTLQRY KELQDIIAIL GLDELSEEDR LTVSRARKIE
KFLSQPFFVA EIFTGMSGKY VKLEDTIAGF NMILAGELDD LPEQAFYLVG NIEEVKAKAD
KINSEK
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