| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_15081 |
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| Symbol | truB |
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| ID | 4720072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 1342775 |
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| End bp | 1343692 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640081199 |
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| Product | putative tRNA pseudouridine 55 synthase |
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| Protein accession | YP_001011822 |
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| Protein GI | 123966741 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.976573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATCA AAGATGGATT TATAATAATA AATAAAGAGA AAGGGTATAC TTCTCATGAT
TGTGTTCAAC AAATAAGAAA ATTATTAGGT ACAAAAAAAG TTGGGCATAC AGGGACTTTA
GATCCAGGAG TAACAGGTAC ATTACCAATT GCCATTGGAA GTGCCACTAG ATTTATTCAA
TACTTACCAC AAGGAAAAAC CTATATTGGG CAAATCCAAT TAGGCATAAG AACAAAAACT
GATGATATAC AAGGAGAAAT CATTAATAAA AAAGAGTGGC CTATTTTGAG CAATGCTCAA
TTAGATAAAT TTTTAAATAA ATTTAGAGGG ATAATTCAAC AAATACCTCC AAAAGTATCT
AGCGTTCACG TAAATGGAGA AAGAGCTTAC AAAAAATTTT TTAAGAATGA GGAATTCGAA
TTAAAACCAA GAGAAGTAAA AATAGAAGAA TTAGTTCTGA AAAAATGGGA CCAAATTAAT
GGAATATTAG AAATAAAAAT TTCATGTTCA ACAGGTACTT ATATAAGATC TATAGCTAGA
GATTTAGGGG GGGTATTAGA CTCTGAAGGT TGTCTATTAA ATCTTAAAAG AATTTCAGCT
TGTGGATTCC ATGAAAAAAA TTCTATTAAA ATATCTGATC TAGTTAATCT GAACAAAAAC
TGTTCCACCT TTATTATTCC TACAATTTAT GCACTTGATC ACATTTCAAC ACTTATTTTA
AATAACCAAG AGGAAATTAA TTTTTGGGAA ACAGGAAGAT TAATTAAATT AGATGAAGAA
AATTTGATTA AAAGCTCCAA ATTTGATTAC AAAAAACCGA TTAAAATTAT CAATAATCAA
AAAATGCTGT TAGGAATTGG TTTTATTAAT GAAGATAAAA ATAAATTACA TCCCAAATTA
GTTCTCAATG CAAAATAA
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| Protein sequence | MEIKDGFIII NKEKGYTSHD CVQQIRKLLG TKKVGHTGTL DPGVTGTLPI AIGSATRFIQ
YLPQGKTYIG QIQLGIRTKT DDIQGEIINK KEWPILSNAQ LDKFLNKFRG IIQQIPPKVS
SVHVNGERAY KKFFKNEEFE LKPREVKIEE LVLKKWDQIN GILEIKISCS TGTYIRSIAR
DLGGVLDSEG CLLNLKRISA CGFHEKNSIK ISDLVNLNKN CSTFIIPTIY ALDHISTLIL
NNQEEINFWE TGRLIKLDEE NLIKSSKFDY KKPIKIINNQ KMLLGIGFIN EDKNKLHPKL
VLNAK
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