Gene P9515_14111 details

Gene Information

• Locus tag: P9515_14111
• Symbol: rfbC
• ID: 4718756
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 1250283
• End bp: 1250840
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 640081097
• Product: dTDP-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_001011725
• Protein GI: 123966644
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.744606
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAGATCT CAGAAACACC CATAGCTGGA GCATATATTC TGGAAAACGA TGTTTATAGA 
GATAATAGAG GTTCTTTTAC TTGTTTTTAT ATTGAGGATG ATTTTAAAAA AAATAATTTG 
AATACTAAAT GGACACAAAT AAATAGCTCA CTAAGTTTTG ATGAAAGAAC ATTAAGAGGT 
ATACATTTTC AGTATCCCCC CTATTCCCAA ATAAAACTAG TTAGGGTAAT CCAAGGATCT 
ATTTTTGATG TAATCGTAGA TTTAAGGCCG AAATCAAAAA CTTTTGGTAA ACACTTCTTT 
TATTTTTTAA ATGAAAAAAA TAATAAGATG CTTTATATTG CGAATGGTTT TGGACATGGA 
TTCATGACAA TGGAAAATAA TACAAAGATT ATCTACAACG TATCTGCACC CTATAAACCA 
GAGTATGAAG AAACAATAAT ATGGAATGAT AAATTATTAA ATATTCAATG GCCAAATTCT 
CCATTAAAAT TATCTGCCAA AGACTTGAAT GGTAAAACAT TTAATGAAAT CAAACTAGAG 
ATTTTAAATA GAGTATGA 

 

Protein sequence

MKISETPIAG AYILENDVYR DNRGSFTCFY IEDDFKKNNL NTKWTQINSS LSFDERTLRG 
IHFQYPPYSQ IKLVRVIQGS IFDVIVDLRP KSKTFGKHFF YFLNEKNNKM LYIANGFGHG 
FMTMENNTKI IYNVSAPYKP EYEETIIWND KLLNIQWPNS PLKLSAKDLN GKTFNEIKLE 
ILNRV