| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_14101 |
|---|
| Symbol | rfbA |
|---|
| ID | 4718755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 1249306 |
|---|
| End bp | 1250196 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640081096 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_001011724 |
|---|
| Protein GI | 123966643 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.659652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATT TAGAAATGAA AAAAAGAAAA GGGATAATTC TTGCTGGAGG TTTAGGTACC
AGATTAAGTC CAATATCTTT AGCTATAAGT AAGCAACTCA TGCCGGTATA CGATAAGCCT
ATGATTTATT ATCCATTAAC CACACTTATG CTGGCTGATA TAAATGATAT TTTATTAATC
TCATCTCCTG ATCATTTAAA TTCATTTAAG AGATTGTTAG GAGATGGAAA ATCTCTTGGC
ATTAATATTG AATATGCTTC TCAGGAAAAA CCACAGGGAA TTGCTCAAGC TTTAATTATT
GGGGAAAAGT TTCTAAATGG ATCCCCATCA GTTTTAATAC TTGGTGATAA TTTATTCCAT
GGGAATGAAC TTCTACCTAA ACTAGAATCT GCAAATCTCA AAAAAGATGG AGCAACAATA
TTCGCATACC CTGTAAGTGA CCCGGAAAGA TATGGAGTTG TTTATTTCAA TAAATCAGGC
AAGGCCTGTT CTATTGAAGA AAAACCTTCA AATCCAAAAA GTAGATTTGC AATAACAGGA
ATTTATTTCT ATGATGATAC CGTCATCTCT AAAGCAAAAA AGATAAAACC ATCTCTTAGA
GGAGAATTAG AGATATCTTC AATTAACAAG TTGTTTCTGC AAGAATCAAA TTTAAATGTT
GAAATAATGG GTAGAGGTAT GGCATGGCTA GATACTGGAA CTTTTGATTC TTTAAATGAA
GCGAGTAACT ATATTAGGGC TTTGGAAAAA AGACAGGGTT TAAAAATCGG ATCCCCAGAA
GAAGTAGCCT GGCGTAAAGG TTGGATAAAA GATTCTCAAC TTAAAGAACT TGGAAATGCT
CTTAAGTCAA GTTCTTATGG TAAGTATCTT TTAGAACTAT TAAAAAATTA G
|
|---|
| Protein sequence | MINLEMKKRK GIILAGGLGT RLSPISLAIS KQLMPVYDKP MIYYPLTTLM LADINDILLI
SSPDHLNSFK RLLGDGKSLG INIEYASQEK PQGIAQALII GEKFLNGSPS VLILGDNLFH
GNELLPKLES ANLKKDGATI FAYPVSDPER YGVVYFNKSG KACSIEEKPS NPKSRFAITG
IYFYDDTVIS KAKKIKPSLR GELEISSINK LFLQESNLNV EIMGRGMAWL DTGTFDSLNE
ASNYIRALEK RQGLKIGSPE EVAWRKGWIK DSQLKELGNA LKSSSYGKYL LELLKN
|
|---|
| |