Gene P9515_13601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_13601 
SymbolserS 
ID4718795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp1192296 
End bp1193573 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content31% 
IMG OID640081045 
Productseryl-tRNA synthetase 
Protein accessionYP_001011674 
Protein GI123966593 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAGATC AAAAATTAAT AAGAGAAAAT CCAACATTTG TGGAAAATAA TTTATCCTTA 
AGAGGTAAAT TTTATGATAT TCATTCCATA CATAAGATTA CTGTAGAAAG AAAGGAAATT
GATATCAAAA TATCAAGCCT ACAATCAGAG AGTAAAAAAT TAAGCAAAAT AATTGGCCAA
GAGATAAGAA ATCCCAATAA TGCTAATTCT CAAGAACTCA ATAAATTAAA AGAACAAGGA
AATAAATACA GAATAAAAGT TTCAGAATTT GAAGAAAAAA AAAGAATACT AGATCAACAA
ATCCGAGATG AAATATTAAA ACTACCTAAT TTCCCAAGTA AAGATGCACC ATTTGGAGAA
AACGAAAGTA ATAATATTCA AATAAAAGAA TGGGGAGATC CGCTAAAAAA AGATAATCTT
AAAACTCATT GGGAAATAGG TGAAAATTTA AAGCTATTTG ATTCCATAAA ATCAACAAAA
ATTGCAAAAA GTCGTTTTAT TACTCTTTCA GGCAATGGCG CAAGGCTGGA GAGAGCTTTA
ATTAATTTTA TGCTAGATGT TCATTCAAAT AATGGTTATT TAGAGTTAAT GCCTCCAGCG
TTAGTTAATT CAGAAAGTCT TCAAGGATCA GGTCAACTAC CTAAATTTTC AAATGAGAGT
TTTAAGTGTG CTAATGATGA CTTATGGCTC TCTCCAACAG CAGAAGTACC TCTGACTGCC
TTTCATAAAA ATGAGATTAT TGATCCAAAA CTTTTGCCTT TAAAATACGT AGCTTATAGT
CCTTGTTTTA GGAGAGAAGC TGGTAGTTAT GGAAGGGATA CAAAAGGGTT AATAAGACTT
CATCAATTTA ATAAGGTTGA ATTATATTGG TTTAGTGATC CAAATAAATC TTTAGAGGCT
CATAAAGAAA TAACTGCGGA CGCAGAGAGT ATTTTAAAAA AACTAAATTT ACCATACAGA
TTAGTAGATA TTTGCACTGG AGATTTAGGT TTTTCTTCTA GCAGAACTTT TGATCTTGAG
GTTTGGTTAC CTAGCAATAA ATGTTACAGA GAAATATCTA GTTGCAGTAA TTGTCGAGAC
TTTCAGGCTC GTAGATCATC AATAAGAACA AAAATTGATA AGAAAACTTC ATATATCCAC
ACTCTAAATG GAAGTGGTTT AGCTATAGGA AGAACAATGG CAGCAATTCT TGAGAATGGC
CAGAGACCTG ATGGAAGTGT AAAAATTCCT GATGTTCTTG TTCCATACTT TGGATCATCT
TTAATAAAAA CTAACTAA
 
Protein sequence
MLDQKLIREN PTFVENNLSL RGKFYDIHSI HKITVERKEI DIKISSLQSE SKKLSKIIGQ 
EIRNPNNANS QELNKLKEQG NKYRIKVSEF EEKKRILDQQ IRDEILKLPN FPSKDAPFGE
NESNNIQIKE WGDPLKKDNL KTHWEIGENL KLFDSIKSTK IAKSRFITLS GNGARLERAL
INFMLDVHSN NGYLELMPPA LVNSESLQGS GQLPKFSNES FKCANDDLWL SPTAEVPLTA
FHKNEIIDPK LLPLKYVAYS PCFRREAGSY GRDTKGLIRL HQFNKVELYW FSDPNKSLEA
HKEITADAES ILKKLNLPYR LVDICTGDLG FSSSRTFDLE VWLPSNKCYR EISSCSNCRD
FQARRSSIRT KIDKKTSYIH TLNGSGLAIG RTMAAILENG QRPDGSVKIP DVLVPYFGSS
LIKTN