| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_13251 |
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| Symbol | psbC |
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| ID | 4718845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 1163241 |
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| End bp | 1164623 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640081009 |
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| Product | photosystem II PsbC protein (CP43) |
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| Protein accession | YP_001011639 |
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| Protein GI | 123966558 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000121028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAACGC CCTTTAATAA TTTATTAAGA GCTCCAAACC AAAGTATCGA GGAAACTGGA
TACGCTTGGT ACGTAGGCAA CGCCAGATTA ATTAATTTGT CTGGACGTTT ATTAGGAGCT
CACATTGCTC ACTCTGGACT TATAGTCTTT TGGGCGGGAG CAATGATGCT TTTCGAGGTT
AATCATTTTA CATTTGATAA ACCTATGTGG GAGCAAGGTT TAATCTGTAT GCCACACGTT
GCGATGTTTG GTTACGGAAT AGGACCTGGT GGTGAAGTAA CAGACATCAT GCCTTTCTTT
CAGGCAGGTG TGGTTCATCT TATTGCTTCA GCTGTTCTTG GTTTTGGAGG TATCTACCAT
TCATTAGCTG GACCCGAAAA GCTTGAAGAA GATTTTCCTT TCTTTTCTAC GGATTGGAGA
GATAAAAATC AAATGACCAA TATTCTTGGA TATCATTTGA TTGTTTTAGG AGTAGGTGCA
TTAGCTTGGT CAGTAAACTG GTGTTTTATT GGCGGTGCTT ATGATACATG GGCTCCTGGA
GGAGGAGAAG TAAGACTTGT CAACCCAACA CTTGATCCTA GAGTTATCCT TGGTTATCTT
TTCAGGTCAC CTTGGGGCGG CGCTGGTTCA ATAATTGGTG TCAACTCAAT AGAAGATATT
GTTGGGGGTC ATGTCTACGT TGGTATAACC GCAATAATTG GAGGTATCTT CCACATCTTC
ACTAAGCCAT TTGGCTGGGC GAGAAGAGCA TTCATATGGA ATGGTGAAGG ACTTTTAAGT
TATGCACTTG GTGGAATATG TGTTGCAAGT TTTATTGCAT CCACTTTCAT TTGGTTTAAC
AACACTGCTT ATCCCTCAGA ATTCTATGGT CCAACAAATG CTGAAGCTTC ACAGGCACAA
AGCTTTACTT TCTTAGTGAG AGACCAAAGA ATTGGAGCCA ACGTAGGTTC AACAATGGGA
CCAACAGGAT TAGGTAAATA CCTCATGAGA TCTCCTACTG GTGAGATTAT ATTTGGTGGT
GAAACAATGA GATTTTGGGA CTTCAGAGGA CCATGGTTAG AACCTCTTAG AGGACCTAAC
GGATTGAGTC TTGAGAAGAT TCAGAACGAT ATTCAGCCTT GGCAAGTAAG AAGAGCTGCT
GAATATATGA CTCATGCTCC TAACGCATCT ATCAACTCAG TTGGTGGTAT CATTACTGAG
CCTAACGCTG TAAATTTTGT TAACCTAAGA CAATGGTTAG CTGCAGCACA ATTCTTCCTA
GGATGGTTTA CTTTCATTGG TCACCTTTGG CATGCTGGTC GTGCTAGAGC TGCCGCAGCC
GGTTTCGAAA AAGGAATCGA CAGAAAGAGT GAACCTGCTC TAGAAATGCC TGACATTGAT
TAA
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| Protein sequence | METPFNNLLR APNQSIEETG YAWYVGNARL INLSGRLLGA HIAHSGLIVF WAGAMMLFEV
NHFTFDKPMW EQGLICMPHV AMFGYGIGPG GEVTDIMPFF QAGVVHLIAS AVLGFGGIYH
SLAGPEKLEE DFPFFSTDWR DKNQMTNILG YHLIVLGVGA LAWSVNWCFI GGAYDTWAPG
GGEVRLVNPT LDPRVILGYL FRSPWGGAGS IIGVNSIEDI VGGHVYVGIT AIIGGIFHIF
TKPFGWARRA FIWNGEGLLS YALGGICVAS FIASTFIWFN NTAYPSEFYG PTNAEASQAQ
SFTFLVRDQR IGANVGSTMG PTGLGKYLMR SPTGEIIFGG ETMRFWDFRG PWLEPLRGPN
GLSLEKIQND IQPWQVRRAA EYMTHAPNAS INSVGGIITE PNAVNFVNLR QWLAAAQFFL
GWFTFIGHLW HAGRARAAAA GFEKGIDRKS EPALEMPDID
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