Gene P9515_12471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_12471 
Symbol 
ID4718939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp1097353 
End bp1098108 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content30% 
IMG OID640080931 
ProductNAD-dependent DNA ligase N-terminus 
Protein accessionYP_001011561 
Protein GI123966480 
COG category[L] Replication, recombination and repair 
COG ID[COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTT ATTTAGAAGA AAGAATTGAA TGGTATGACC ATAATTATAG AATGGGAACT 
CCTTTAATTA GTGATGTCCA ATTCGATCAA TTAGAAGCTA ATTTATATCG AGTAAATCCA
AAAGCTAATT ACTTTCATAA AAAATCAATA TTACCTTTAC CATCATTGCC AAAAGATAAA
ATTTCAGAAT TTTTAGAAGG ATTATTGCCA AATACAAGAT TAATTATTGA ACCTAAAATT
GATGGTTGCG CAATCGGTAT TCAATATATT GATGGCCAAT TAATAAAAGC AATTTCAAGA
AAAGGTGATG ATGTTACTAA CAAAATAAAA GAGATTCTTG ATGTTCCAAA TGAGATAAAA
GTTAAAGGTT TAATCCAAGT GAGAGGAGAG CTCTTTGCCC CATTGGAAAA TGAAAGGCCA
ACTTATTCTC AAAGAAAGGC AGGTGGTTAT CTTCGGAATG AAGCCAGTAA AAACGATCAT
CTCAGCTTTT GTGGCTTTCA GATAATTAAT GGCAGATTAA ATGAACATGA TTCTTTGGTG
TATTTGAAGA AGTTGGGTTT TACAATTCCA GAATATAAGA GTTTAAAGTA TTTAACTCAA
GTTGAAATGT ATAGAAAACA ATGGGCTGAA AAAAAACTAT TTACTCAATA TCCAACAGAT
GGAATAGTAG TTAAACTAAA TTCCAGAAAA TTACAATTAA TTAGAGAAAA ATCTGTTGGT
TGCTATCCTT ACTGGCAGAT GGCAATAAAT TTTTAA
 
Protein sequence
MTIYLEERIE WYDHNYRMGT PLISDVQFDQ LEANLYRVNP KANYFHKKSI LPLPSLPKDK 
ISEFLEGLLP NTRLIIEPKI DGCAIGIQYI DGQLIKAISR KGDDVTNKIK EILDVPNEIK
VKGLIQVRGE LFAPLENERP TYSQRKAGGY LRNEASKNDH LSFCGFQIIN GRLNEHDSLV
YLKKLGFTIP EYKSLKYLTQ VEMYRKQWAE KKLFTQYPTD GIVVKLNSRK LQLIREKSVG
CYPYWQMAIN F