Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_12471 |
Symbol | |
ID | 4718939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 1097353 |
End bp | 1098108 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640080931 |
Product | NAD-dependent DNA ligase N-terminus |
Protein accession | YP_001011561 |
Protein GI | 123966480 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATTT ATTTAGAAGA AAGAATTGAA TGGTATGACC ATAATTATAG AATGGGAACT CCTTTAATTA GTGATGTCCA ATTCGATCAA TTAGAAGCTA ATTTATATCG AGTAAATCCA AAAGCTAATT ACTTTCATAA AAAATCAATA TTACCTTTAC CATCATTGCC AAAAGATAAA ATTTCAGAAT TTTTAGAAGG ATTATTGCCA AATACAAGAT TAATTATTGA ACCTAAAATT GATGGTTGCG CAATCGGTAT TCAATATATT GATGGCCAAT TAATAAAAGC AATTTCAAGA AAAGGTGATG ATGTTACTAA CAAAATAAAA GAGATTCTTG ATGTTCCAAA TGAGATAAAA GTTAAAGGTT TAATCCAAGT GAGAGGAGAG CTCTTTGCCC CATTGGAAAA TGAAAGGCCA ACTTATTCTC AAAGAAAGGC AGGTGGTTAT CTTCGGAATG AAGCCAGTAA AAACGATCAT CTCAGCTTTT GTGGCTTTCA GATAATTAAT GGCAGATTAA ATGAACATGA TTCTTTGGTG TATTTGAAGA AGTTGGGTTT TACAATTCCA GAATATAAGA GTTTAAAGTA TTTAACTCAA GTTGAAATGT ATAGAAAACA ATGGGCTGAA AAAAAACTAT TTACTCAATA TCCAACAGAT GGAATAGTAG TTAAACTAAA TTCCAGAAAA TTACAATTAA TTAGAGAAAA ATCTGTTGGT TGCTATCCTT ACTGGCAGAT GGCAATAAAT TTTTAA
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Protein sequence | MTIYLEERIE WYDHNYRMGT PLISDVQFDQ LEANLYRVNP KANYFHKKSI LPLPSLPKDK ISEFLEGLLP NTRLIIEPKI DGCAIGIQYI DGQLIKAISR KGDDVTNKIK EILDVPNEIK VKGLIQVRGE LFAPLENERP TYSQRKAGGY LRNEASKNDH LSFCGFQIIN GRLNEHDSLV YLKKLGFTIP EYKSLKYLTQ VEMYRKQWAE KKLFTQYPTD GIVVKLNSRK LQLIREKSVG CYPYWQMAIN F
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