| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_12311 |
|---|
| Symbol | |
|---|
| ID | 4718923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 1086381 |
|---|
| End bp | 1087274 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640080915 |
|---|
| Product | ABC transporter for amino acids, membrane component |
|---|
| Protein accession | YP_001011545 |
|---|
| Protein GI | 123966464 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.351586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA ATAAAAAAAT AGTTCTTCAG TTTGTTTTGA TGTTTGCCGT TCTTGGTTTT
TTAGGGATAT TAATTAATAA TTTAATGATT AACCTTAAAA GAACGGACAT AGGATTCAAG
TTTGATTGGT TAATAAAGCC AGCAAGCTTT TCTTTAGCAG AACATTCCTT GCCCTACAGT
CCTTCAGATA ATTATGCATG GGCCATTTTT ATTGGATGGA TGAATAGCTT GAAAGTTATT
ATTTCATCTC TTATTTTAGC GACTTGTCTT GGAACATTAA TAGGTTTTTT GAGAGTAGGT
AAAAATTCAT TTTTTAGAAT TTTTACAGCT GGATATATTA CAGTTATTAG ACAGACACCA
CTATTAATCC AACTTATGTG TTGGTATTTT GTTGGATTTT TGAGTATTAG AAATAATTCT
TTTTTGAATG TAAGAAATAT AGTGAATATT TCAAATAGAG GGATAGAGTT ATTTGGACTT
AATTTCTCTT CAGAGTTTTC AGCATTATTG TTTGGTTTAA GTATATTTTC AAGTGCGTTT
ATTGCGGAAG TAATTAGAGG GGGAATTCAG TCTGTCCCTT TAGGTCAATG GGAAGCATTT
CGAAGTTTAG GTATTTCTGA GAAACAAGGA TTTATTAAAA TAATAATACC TCAAGCATTA
CCAGCCTTTA TTCCAGGACT TACAAGTCAA TATTTAAATC TTGCAAAAAA TAGTACGCTC
GCTATAGCCG TAGGATATTC AGATATTTAT GCGATAAATG ATACGATAAT AAACCAAACG
GGAAGAGCTT TAGAGTGCTT TATAATTTTA CTTTTCAGTT TTTTAATCCT TAATTTATTA
ATAACAAAAG TAATGGAAAT TATTGATAAA TCAATAATGA AAAAAAGGAT ATAA
|
|---|
| Protein sequence | MSKNKKIVLQ FVLMFAVLGF LGILINNLMI NLKRTDIGFK FDWLIKPASF SLAEHSLPYS
PSDNYAWAIF IGWMNSLKVI ISSLILATCL GTLIGFLRVG KNSFFRIFTA GYITVIRQTP
LLIQLMCWYF VGFLSIRNNS FLNVRNIVNI SNRGIELFGL NFSSEFSALL FGLSIFSSAF
IAEVIRGGIQ SVPLGQWEAF RSLGISEKQG FIKIIIPQAL PAFIPGLTSQ YLNLAKNSTL
AIAVGYSDIY AINDTIINQT GRALECFIIL LFSFLILNLL ITKVMEIIDK SIMKKRI
|
|---|
| |