Gene P9515_12301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_12301 
Symbol 
ID4718922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand- 
Start bp1085354 
End bp1086373 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content30% 
IMG OID640080914 
ProductABC transporter for amino acids, membrane component 
Protein accessionYP_001011544 
Protein GI123966463 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.523561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT TAAATACACA TTCATTTAAA AAACTTAAAA AATTTTTAAA ATCAAAACCA 
AAATATAATT TTTTCAATTT TATATTTTTT GTGTTTTCAA TTTTATTGAC TTTAAAAATT 
TCAACTTGGA TTTTTTTTAA ATCAAATTGG AAAGTTGTAA CATCAAATCT TAATTTATAT 
GCATTTGGGA GCTTTCCAAT TAATGAGCAA TGGAGGCCTA CTCTTTGGTT CTTAAGTCTT 
TTATCTATTA CCTTTATTAC TGTTTATGGC CCAAAATGGA ATTGGCTCCG TAAAAATTTA 
ATTTTTGGAT GGATGGGAAC AGTACCTTTA GGGATTTACT TGCTAAATGG TGGTTTGGGT 
TTAGTTCCTG TAATGACTCG TCATTGGGGT GGGTTAACAC TAACAATTCT TATAACTTCT 
TGTAGTATTC TTTTTTCTTT GCCAATTGGA ATTGTATTAG CTCTTTGCAG AAGAAGTTCA 
ATGTTTTTAA TTCAAAAACT AAGTTCTTTT TATATTGATG TAATGAGAGC TGTTCCTCTT 
ATCGCCGTAC TTTTTTTTGG ACAATTGTTA ATACCTTTAT TTCTACCTGT CGGTCTAGAA 
ATAGAACGTG TCTGGAGGGC AATAATAGCA TTTACTTTAT TTGTTTCAGC ATATATAGCT 
GAAGATATTC GCGGGGGATT ACAATCAATA CCTAATAATC AAATAGAAGC TGCTAAAAGT 
CTTGGCTTGA ACAAATATCA AGTCAATATA TTTATTCTTA TTCCTCAAGC CTTAAGAGTT 
GCATTGCCAG CTATTACAAA CCAGTTAATT GGGCTTTTTC AAAATACATC TTTAATGTCT 
ATCCTAGGTT TAATGGAATT ACTTGGGGTA AGTAGAAGTA TTCTTGCCAA TCCAGAATTC 
ATAGGACAAT ATATTGAAGT ATATATTTGG TTAGCTTCCG TATACTGGTT ATTTTGCACA 
GTTATGGCAT TTGTTTCAAA AAAGCTCGAG CAGAGAATGA CAATTAACAA AGGATTTTAA
 
Protein sequence
MNNLNTHSFK KLKKFLKSKP KYNFFNFIFF VFSILLTLKI STWIFFKSNW KVVTSNLNLY 
AFGSFPINEQ WRPTLWFLSL LSITFITVYG PKWNWLRKNL IFGWMGTVPL GIYLLNGGLG 
LVPVMTRHWG GLTLTILITS CSILFSLPIG IVLALCRRSS MFLIQKLSSF YIDVMRAVPL 
IAVLFFGQLL IPLFLPVGLE IERVWRAIIA FTLFVSAYIA EDIRGGLQSI PNNQIEAAKS 
LGLNKYQVNI FILIPQALRV ALPAITNQLI GLFQNTSLMS ILGLMELLGV SRSILANPEF 
IGQYIEVYIW LASVYWLFCT VMAFVSKKLE QRMTINKGF