| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_12061 |
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| Symbol | crtH |
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| ID | 4718969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 1063070 |
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| End bp | 1064614 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640080888 |
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| Product | putative carotenoid isomerase |
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| Protein accession | YP_001011520 |
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| Protein GI | 123966439 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02730] carotene isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.809432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCTT ATAAAGAAAG TTTTGATGCA ATTATTATTG GCTCTGGAAT AGGGGGATTG
GTAACTGCCT CACAATTAGC GTCCAAAGGT GCGAAAGTTC TAGTGCTTGA AAAATATATT
ATTCCTGGAG GTAGCGGAGG ATCATTTAAG AGAAAAGGCT ATACCTTTGA TGTAGGAGCA
TCTATGATTT TTGGTTTTGG GGAGACTGGA TATACCAATT TGCTAACTCG CGCTTTAAAG
GATGTAAATG AAAAATGTGA AACAATCCCT GATCCTGTCC AACTCGAATA TCATCTTCCT
GATGGATTCA GTATTTCTGT AGATAAAAGT TACGAGAAAT TTATAAGTAA ATTGTCTGAA
CGTTTTCCAC ATGAGAAGGA GGGAATTAAA AAATTTTATA AAACTTGTTC AAATGTTTTC
AATTGTTTAG ATTCAATGCC GCTTTTATCA ATTGAAGACC CTAGTTATCT TTTTAAGGTT
TTCTTTAAGG CGCCACTATC TTGTTTAGGT TTAGCGAGAT GGCTACCAAT AAATGCTGGC
GATGTTGCAA GAAGGTTTAT TAATGATCCT GAACTTTTGA AATTTATTGA TATTGAATGT
TTTTGTTGGT CAGTAATGCC TGCTATTAAA ACTCCAATGA TCAATGCAGG TATGGTTTTT
ACCGATAGAC ATGCCGGCGG TATTAATTAT CCAAAAGGGG GAGTAGGCAA GATTGCAGAG
AAATTAGTTT CAGGATTGGA AAAATTAGGC AGTAAAATTC GGTATAGAGC TAATGTTGTT
GAAATACTTT TAAAAGATAA AAAAGCGATA GGAGTAAAAC TATCAAATGG AGAAGAAATC
TACTCAAATA TTATCGTGTC TAACTCTACA AGATGGGACA CTTTTGGACT TGATAATCAA
AAAAAAGGAC TAATTAAAAG TGATTCGGTT CCAAAAAATG AACATAAATG GTCAGAAACT
TATAAACCTT CGCCATCTTT TGTTTCAATT CACCTTGGTG TTAATCAAGA TTTAATAGAT
AAAGATTTTA ATTGTCATCA TATTATTGTT GAAAATTGGA ATGAATTAGA AAATGAAAAA
GGGGTGATTT TTATTTCTAT TCCAACCTTA CTAGATCCAT CTTTAGCGCC AAAAGGTAAA
CATATTATCC ATACCTTTAC ACCTTCATCA ATCGATGAAT GGGAGAACCT ATCAAGAAAA
GACTATATCA AGAAAAAGGA ACTATATTAT AATTTTATGA TTGAAAAAAT TTCTAAATTA
ATTCCTAACT TAGATCAAAA TATTGATCAT AAAGAAATTG GCACTCCAAG AACTCATAAG
AAATTCCTTG GAAGATTCGA AGGTAGTTAT GGACCAATTC CTAATAAAAA ATTATTGGGA
CTACTCCCCA TGCCATTCAA TACTACAAAA ATTAGAAACC TCTATTGCGT CGGCGATTCA
TGTTTCCCCG GACAAGGTCT GAATGCAGTA GCGTTTAGTG GTTATGCTTG CGCTCACAAA
ATAGGATCTA AATTAAATAT AAATAGTTTT AATTTGCCAG ACTAA
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| Protein sequence | MQSYKESFDA IIIGSGIGGL VTASQLASKG AKVLVLEKYI IPGGSGGSFK RKGYTFDVGA
SMIFGFGETG YTNLLTRALK DVNEKCETIP DPVQLEYHLP DGFSISVDKS YEKFISKLSE
RFPHEKEGIK KFYKTCSNVF NCLDSMPLLS IEDPSYLFKV FFKAPLSCLG LARWLPINAG
DVARRFINDP ELLKFIDIEC FCWSVMPAIK TPMINAGMVF TDRHAGGINY PKGGVGKIAE
KLVSGLEKLG SKIRYRANVV EILLKDKKAI GVKLSNGEEI YSNIIVSNST RWDTFGLDNQ
KKGLIKSDSV PKNEHKWSET YKPSPSFVSI HLGVNQDLID KDFNCHHIIV ENWNELENEK
GVIFISIPTL LDPSLAPKGK HIIHTFTPSS IDEWENLSRK DYIKKKELYY NFMIEKISKL
IPNLDQNIDH KEIGTPRTHK KFLGRFEGSY GPIPNKKLLG LLPMPFNTTK IRNLYCVGDS
CFPGQGLNAV AFSGYACAHK IGSKLNINSF NLPD
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