| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_11631 |
|---|
| Symbol | |
|---|
| ID | 4718983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 1016594 |
|---|
| End bp | 1017895 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640080844 |
|---|
| Product | putative glucose 6-phosphate dehydrogenase effector OpcA |
|---|
| Protein accession | YP_001011477 |
|---|
| Protein GI | 123966396 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3429] Glucose-6-P dehydrogenase subunit |
|---|
| TIGRFAM ID | [TIGR00534] opcA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAC AATTAACACT TCAAACCCCA CTAGAACTTC CTCCTCAAGA AATATCTAAT
TACTTAAATC AATTATGGAT TTCTGAAGAT GAAGATAATT CTGGAGCCAA TACTTTTACT
TTGATGGTCT GGCAGCCTGC GTGGCTTGAA CAATGCTTAG TTCAATCAGG CTTAATAAAT
GGACCAATCA CTGGTACTTT AAGTCCAGAG ATTATAAAAG TTGCTAAGAA AGTTATCGTT
GATAAAAGGT TGCCTCATAC GACTTCGATT AAAAGCGAAG AGTTATTAAC TTCGTTGAAG
GATAATTCTT TAAATAATGA TTATGAAGAC CTGAGAGGGC AATTCTTTGA ATCCTCAATA
AGTACTCTAA ATCCTAGAAG ATTAATTACC CTAGCACCAA CTTTTAATAA AGAATCAGAG
ATTAAAACTT TTGTATCTGC CTATTGCCCA CTAAGTGATA ACGCTATAAA TCAACCTATT
TGTGGTGACT TGGTTGTTAT AAGGGGGGAT TCTAATTCTA TAAAAAAGAA AGGATTGAAA
ATTATTGATG AACTATCCAT AAAAGAATTA CCTACTTGGT TATGGTGGAA TGGAAGCCTA
GATGAATCCC CAGAAATTTT TAATTATTTT ACAGACTATG GTATAAGGTT AATTGTTGAT
ACTGCAAATG GCTCGCCTAA TAGATGCTTA AAGATTCTTG ATCAATCAAT AAGGTCAAAT
AAAGCTATTA ATGATTTAAA TTGGTTAAGA CTTAAAAGTT GGCGTGAATC ATTAGCAATG
ATTTTTGATC CTCCATCGAG GAGACCTATA TTAGATCATA TTTCGGATAT TGACATAGAT
ATTGCAGAAG GTAATTTGCT TCAAGCGTTA TTTTTAATAT CATGGATTAG TGACAAATTA
GAATGGGTAT TTTCAAAAAT AGATAAACAT GGAGGATTAA TAAAAATAGA ATTCAAAAGA
GACAATGGTG AGAAAATTTC AACATGTATA AACCCTTTAC CTTTAGGTAA TCCAAGTATT
CATTCGGGAC AAGTCATTGG ATTAAGGTTG ATTTCCAAAA TTAGTGAGGT TCAAAAAAAT
AATACTTGTG TAATTCTTGG ATGTGAATCT GTTGAATGTA TGAGACTTGA AGCCGGAGGT
ATGGCTGATA TGCAATTAAT AGAACAAGTT GTCCCAAATG ATTTTTCTTC ATCAGAATTT
GATGTTAGTA AGTTATTGGG GAGTAGTAGA GGAAATACTA GCCCACTTTT TGAAAATGCT
ATTAAGGTTG CAGTTCAAAT ATTTAATAGT CTTTGTAAAT AA
|
|---|
| Protein sequence | MKPQLTLQTP LELPPQEISN YLNQLWISED EDNSGANTFT LMVWQPAWLE QCLVQSGLIN
GPITGTLSPE IIKVAKKVIV DKRLPHTTSI KSEELLTSLK DNSLNNDYED LRGQFFESSI
STLNPRRLIT LAPTFNKESE IKTFVSAYCP LSDNAINQPI CGDLVVIRGD SNSIKKKGLK
IIDELSIKEL PTWLWWNGSL DESPEIFNYF TDYGIRLIVD TANGSPNRCL KILDQSIRSN
KAINDLNWLR LKSWRESLAM IFDPPSRRPI LDHISDIDID IAEGNLLQAL FLISWISDKL
EWVFSKIDKH GGLIKIEFKR DNGEKISTCI NPLPLGNPSI HSGQVIGLRL ISKISEVQKN
NTCVILGCES VECMRLEAGG MADMQLIEQV VPNDFSSSEF DVSKLLGSSR GNTSPLFENA
IKVAVQIFNS LCK
|
|---|
| |