Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_10161 |
Symbol | ksgA |
ID | 4719164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 909296 |
End bp | 910126 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640080696 |
Product | dimethyladenosine transferase |
Protein accession | YP_001011330 |
Protein GI | 123966249 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTA AGAACCATCA TCAAAAAAAA AGATTTGGAC AACATTGGTT GGTTAATAAT TTAATATTGG AAAAAATAAA AGAAGTCGCT GAACTCGATG AAAAAGATTT TATTCTAGAA ATTGGTCCGG GAAAAGGGGC TTTAACATCG AAATTGTTAG ATTCAAAAAT TAGTAGATTA CATGCCGTCG AATTGGATAA AGATTTAATT GACCTTTTAA ATAATAAATT TAGAAATGAT AAAAAGTTTT CACTTCAACA AGGCGATATC CTTTCAACAA ATCTTGACTC CATAAATAAA AAAATTACAA AAGTGATTGC AAATATTCCT TATAATATTA CAGGTCCAAT ATTGGATATT TTTATTGGAA GATTAGGAAT AGTTAGTAAG AATAATTACA AGAAAATAAT TTTCTTAATG CAGAAGGATG TTGTGGATAG GATTTTATCT AAAGAAAGTA GTAAGAATGC AGGAGCTATG AGTGTGAGGA TGCAACTTAT CTCTAACATA AAAAGAATAT GCGATGTGCC TCCATCATCT TTTAACCCAC CTCCAAAAGT ATTTTCTTCT TTGGTTGTTT TTGAACCATT GAGGCCTGAG AAACGATTAG ATATTAAACT AGAGAGATAT ATAGATAAAC TTCTTCAAAT TTCATTTAAT TCAAGAAGAA AAATGATTAG AAATACTCTT AATTCAATCC TCTCAGAGGA TGAGATTAAG AAATTAGCTG AATTATCTGA AATATGCTTT AATTCAAGAC CTCAAGATAT TTCAATTAAT AAATGGATTA AGCTTGCAGA GGGATGTATT AAAATAACAA ATAAGAATTA G
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Protein sequence | MNFKNHHQKK RFGQHWLVNN LILEKIKEVA ELDEKDFILE IGPGKGALTS KLLDSKISRL HAVELDKDLI DLLNNKFRND KKFSLQQGDI LSTNLDSINK KITKVIANIP YNITGPILDI FIGRLGIVSK NNYKKIIFLM QKDVVDRILS KESSKNAGAM SVRMQLISNI KRICDVPPSS FNPPPKVFSS LVVFEPLRPE KRLDIKLERY IDKLLQISFN SRRKMIRNTL NSILSEDEIK KLAELSEICF NSRPQDISIN KWIKLAEGCI KITNKN
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