Gene P9515_10131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_10131 
SymbolpdhB 
ID4719161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand- 
Start bp906847 
End bp907830 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content34% 
IMG OID640080693 
Productpyruvate dehydrogenase E1 beta subunit 
Protein accessionYP_001011327 
Protein GI123966246 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0453962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTAGTA CTTTATTATT TAATGCTTTG AAAGAAGCAA TTGATGAAGA GATGGCAAAT 
GATGTAAACG TTTGCGTTAT GGGAGAAGAT GTAGGCCAAT ATGGTGGTTC TTATAAAGTC 
ACTAAAGATC TATATGAAAA ATATGGCGAA TTAAGAGTTT TAGATACTCC AATTGCCGAA 
AATAGTTTTA CGGGGATGGC AGTTGGTGCT GCAATGACAG GATTAAGACC GATAGTGGAA 
GGTATGAACA TGGGATTTCT ACTATTAGCC TTTAATCAAA TTTCTAATAA TATGGGCATG 
CTCAGATATA CAAGTGGGGG CAATTATAAA ATACCTGCAG TTGTTCGTGG CCCTGGCGGT 
GTTGGGAGAC AACTAGGCGC TGAACATAGT CAAAGATTAG AGGCTTACTT TCACGCAGTT 
CCTGGGATCA AGATAGTTGC TTGTAGTACC CCCACAAATG CAAAAGGATT AATGAAAGCT 
GCTATAAGGG ACAATAATCC CGTTTTATTT TTTGAACATG TCCTTTTATA CAATTTATCT 
GAGGAATTGC CTGAGGGAGA TTATATCTGT TCTTTAGATC AAGCTGACAT AGTCAAAGAG 
GGGAAAGATA TTACGATTCT TACCTATTCA AGAATGAGAC ATCATTGTTT AAAAGCTATT 
GAAGAGTTAG ATAAGAAGAA TATCGATGTC GAATTAATAG ATCTGATAAG TTTAAAACCT 
TTTGATATGA AAACAATTTC GAAATCTATT AAAAAAACTA ATAATGTAAT TATTGTAGAA 
GAATGTATGA AAACTGGAGG AATTGGAGCA GAATTGATTG CTTTGATTAC AGAAGAATGT 
TTTGATGATC TTGATCATAG ACCTATAAGA TTATCTAGTC AGGATATTCC TACTCCTTAT 
AATGGTAATT TAGAAAATTT AACAATAATT CAACCGCATC AAATAGTCGA AAAAGTAGAA 
GAAATAATCA ATGGGAGTAT TTAA
 
Protein sequence
MASTLLFNAL KEAIDEEMAN DVNVCVMGED VGQYGGSYKV TKDLYEKYGE LRVLDTPIAE 
NSFTGMAVGA AMTGLRPIVE GMNMGFLLLA FNQISNNMGM LRYTSGGNYK IPAVVRGPGG 
VGRQLGAEHS QRLEAYFHAV PGIKIVACST PTNAKGLMKA AIRDNNPVLF FEHVLLYNLS 
EELPEGDYIC SLDQADIVKE GKDITILTYS RMRHHCLKAI EELDKKNIDV ELIDLISLKP 
FDMKTISKSI KKTNNVIIVE ECMKTGGIGA ELIALITEEC FDDLDHRPIR LSSQDIPTPY 
NGNLENLTII QPHQIVEKVE EIINGSI