Gene P9515_10081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_10081 
Symbol 
ID4719156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp901715 
End bp902767 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content27% 
IMG OID640080688 
ProducttRNA 2-selenouridine synthase 
Protein accessionYP_001011322 
Protein GI123966241 
COG category[R] General function prediction only 
COG ID[COG2603] Predicted ATPase 
TIGRFAM ID[TIGR03167] tRNA 2-selenouridine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.741819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTCCA AAAGAGAAGA ACTAGAGAAA TTTAGGAAGC GTAACGGACC ACTTATCGAT 
GTTAGAAGTC CCGGAGAATA TTATAAAGGA AATATGCCAA ATTCTATAAA TATTCCGTTA
TTTGATAATG AAGAGAGATC AATAGTAGGA ACTATATATA AAAAGCATGG AAGAGAAAAA
GCAGTAATTC AAGGTTTGGA ATTTATAGCT GAGAAAATAG AAACTATTGT GAATAAATTA
TTTGAGACTA TTAATGATTA TAATTCTAAA AATTATATTT CAAAATTAGA AGAGCCTACT
TTAAAAATTT ACTGTGCTAG AGGTGGAATG AGGTCTCAAA GTATATCTTG GCTTTTAGAA
AAATACAATC AGAGAAGCGT TATATTGGAA AATGGTTATA AAAGATATAG AAAATGGATT
TTAGAAAGCT TTAATCAAGA GTGGAAAATA ATTGTTATTG GAGGTAAAAC CGGTACAGGG
AAAACTAAAT TATTAAAATT ACTTGATAAA AACAATTATC AAATAATTGA TTTAGAAGGG
TTAGCTTGCC ATAGGGGAAG TACTTTTGGA GGCCTAGGAA TGAGAGAACA ACCTTCAAAT
GAACAATTTG AAAATAAAAT AGCAGAGGAG CTAAAAGGAT TTAAAAAAAA CAATAAAATA
TTCGTTGAAG CAGAAAGTTC AAATATTGGA AAATGTAAAA TCCCTCATGA GTTTTTTAAT
CAAATGAAAA CAGCAGAAAG AATTGAGATC AAAAAAAGTG AATCAAATCG TTTAGAAGAA
TTAATACAAA CATATAGTAT CTTCCAAGAA AAAGACCTTA TAGAAGCAGT TTTAAGAATA
AAAAAAAGAC TAGGTCCACA AAGAACAAAA AATGCAATTG AGTCAATAAA AATTAAAGAT
TGGAAATCAG TTTGCAAATC TGTTTTAGAA TATTATGATA AATGCTATGA ATATGAAAAA
ACTGGTAAAA ACAATATAAA AGTAATTGAC ATGACTGATA TATTTGACGA TCAAAAAACT
TTGAGATTAA TAAAAGAATT TATGAAATTC TAA
 
Protein sequence
MYSKREELEK FRKRNGPLID VRSPGEYYKG NMPNSINIPL FDNEERSIVG TIYKKHGREK 
AVIQGLEFIA EKIETIVNKL FETINDYNSK NYISKLEEPT LKIYCARGGM RSQSISWLLE
KYNQRSVILE NGYKRYRKWI LESFNQEWKI IVIGGKTGTG KTKLLKLLDK NNYQIIDLEG
LACHRGSTFG GLGMREQPSN EQFENKIAEE LKGFKKNNKI FVEAESSNIG KCKIPHEFFN
QMKTAERIEI KKSESNRLEE LIQTYSIFQE KDLIEAVLRI KKRLGPQRTK NAIESIKIKD
WKSVCKSVLE YYDKCYEYEK TGKNNIKVID MTDIFDDQKT LRLIKEFMKF