Gene P9515_09171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_09171 
Symbolfmt 
ID4719325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand- 
Start bp819624 
End bp820610 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content28% 
IMG OID640080595 
Productputative methionyl-tRNA formyltransferase 
Protein accessionYP_001011231 
Protein GI123966150 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAATTA TATTTTGGGG AACTCCTGAA TATTCAGTAA AAAGTCTTGA AGTATTAAAA 
AAATCAGATC ATGAAATTTT AGCTGTCATA ACGCAGCCAG ATAAAAAAAG ATCTAGAGGT 
AATAAATTAA TAGCGTCCCC AGTAAAGCAA TATGCTATGA AGGAAGGGCT TCCAGTTTTC 
ACACCTGAAA CTTTAAAGAA AAATGATCAT TTTATAAGTT TACTTAAAGA ATTTTCTTGC 
GATTTGTTTG TTGTTATTGC TTATGGAAAA ATATTACCAA AAAAAATATT AGATATTCCT 
AAATATAAAT CATGGAATGC GCATGCATCA CTACTTCCAA GATGGAGAGG TGCCGCTCCC 
ATCCAATGGT CAATATTGGA GGGAGATGAT TTTACTGGTG TTGGAATAAT GAGAATGGAA 
GAAGGATTAG ATACTGGAGA TGTATTAGTT GAAAAACAAA TCAAAATTGA GAAAGAAGAT 
AATCTTCAGA CGTTAACAAA AAAATTAAGT GATTTATCAT CAGAATTATT ATTAAAAGCG 
ATATCAAAAA TAGAGCAAAA TAAAAATAAA GATATTAATC ATTTACTTAA AAAACAAAAA 
GATCTTCAAA GAAAATTAAA ATATGCAAGA ATGATTAACA AATCAGACTA CATAATAGAT 
TGGGCAAATA ATTCAACTGA TATATACAGA AAAATAAATG CCTTATACCC TAGAGTTAGT 
ACAACATTTA AAAAGAAAAA TCTAAAAATA ATTAAAATAA AAATTCTAAC AACAGATGAG 
ATACAGAATA AAAATTATAA AATTGTAAGC GATAAATTTA AACCTGGATA CGTTATTGGT 
CTTATAGAAA ACAAAGGTAT CATTATATCA ACTAAAACTG ATCCAATTCT TTTATTAGAG 
GCAAAACTAG AGGGTAAAAA TATATCTAAG CAAAAGCAGC TTTTACAACA ATTAAATCCT 
CTTATAGGAG AAAAATTCTC AGATTAA
 
Protein sequence
MRIIFWGTPE YSVKSLEVLK KSDHEILAVI TQPDKKRSRG NKLIASPVKQ YAMKEGLPVF 
TPETLKKNDH FISLLKEFSC DLFVVIAYGK ILPKKILDIP KYKSWNAHAS LLPRWRGAAP 
IQWSILEGDD FTGVGIMRME EGLDTGDVLV EKQIKIEKED NLQTLTKKLS DLSSELLLKA 
ISKIEQNKNK DINHLLKKQK DLQRKLKYAR MINKSDYIID WANNSTDIYR KINALYPRVS 
TTFKKKNLKI IKIKILTTDE IQNKNYKIVS DKFKPGYVIG LIENKGIIIS TKTDPILLLE 
AKLEGKNISK QKQLLQQLNP LIGEKFSD