Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_08581 |
Symbol | |
ID | 4719354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 771911 |
End bp | 772903 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640080535 |
Product | RNA processing exonuclease |
Protein accession | YP_001011172 |
Protein GI | 123966091 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0814782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGAGAAG ATAGCTTTCA TTTAATCAAA TATACTAGCA GTGGTTTGTA TTGCGAAGTT GCTGATTTAT GGATTGATCC AAAAAAGCCG GTAAAACAAG CTATCATAAC TCATGCTCAT ATGGATCATT TTACTTTTGG ATGCGAAGAG TATATCTCAA CTTTAGAAAC AGCCATAATT TTAAAGGAGA GAATAGGAAA GGATATCAAT ATTAGAACTT ATGAATATGA AAAAGAATTT AAGGTTAACG GTATTAAAAT TTCTTTTCAT CCTTCAGGAC ATATTCTTGG CTCAAGCCAA ATAAAAATTA ATATGGCTGA TGAGATTTGG TTGATAACTA GTGATTTTAA ACGCCAAAAA GACGATACTT GTAAAAAGTA TGAAATAGTA AAGACTGATT TTTTAATAAG TGAATCAACT TTTGGGTTAC CAATATTTAA TTGGGATGAA CCTCAAAATA CCGCATTAGA AATAAAAAAA TGGATACATA CATCTCATGA AACAACATAT TTCTTATTTT GTTATTCTCT TGGGAAAGCA CAAAGACTAT TAAATGAAAT TAGTAAATTA AATTTTACAA ATAATATTTT CACACACAGC AGTATAGATA AGATGAACAA ATGTTATAAA AATTTTGGAG TTGAAATCAT AGAGACAAAG AAATTTGAAA ATAATAAAAA TATTGGTGAT CTTAAAGGAA GTTTAATATT ACTTCCACCA GCATTGAATA GAAATTCTTT TCTGAAGAGA TATAAAGACT TTCAAACTGG ATTTGCAAGT GGTTGGATGT CAATTAGGGC ACTTAGAAAA AGGTCTGGAT ATGATAAAGG TTTTCCAATC TCAGATCATG CTGATTGGAG TGGTATTTTA AAGACAATAG AAGAATCTAA AGCTAAAAAT GTTTTTTTCC ATCATGGAGA TAGTGAAGTT TTAATTAAAT ATTTAAAAGA AAAAAAATCT ATCAATGTTC TTGAATTTGA ATATAAAAAA TGA
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Protein sequence | MREDSFHLIK YTSSGLYCEV ADLWIDPKKP VKQAIITHAH MDHFTFGCEE YISTLETAII LKERIGKDIN IRTYEYEKEF KVNGIKISFH PSGHILGSSQ IKINMADEIW LITSDFKRQK DDTCKKYEIV KTDFLISEST FGLPIFNWDE PQNTALEIKK WIHTSHETTY FLFCYSLGKA QRLLNEISKL NFTNNIFTHS SIDKMNKCYK NFGVEIIETK KFENNKNIGD LKGSLILLPP ALNRNSFLKR YKDFQTGFAS GWMSIRALRK RSGYDKGFPI SDHADWSGIL KTIEESKAKN VFFHHGDSEV LIKYLKEKKS INVLEFEYKK
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