| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_08251 |
|---|
| Symbol | sir |
|---|
| ID | 4719407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | + |
|---|
| Start bp | 746528 |
|---|
| End bp | 748318 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640080504 |
|---|
| Product | sulfite reductase subunit beta |
|---|
| Protein accession | YP_001011141 |
|---|
| Protein GI | 123966060 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | [TIGR02042] ferredoxin-sulfite reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATCAAGG TCGAAAAAGT AAAAAAGAAA AAAAAGATTG AAAAACAAGA GACGGTTTGC
TTAGCAAATG GTCTAGAGGT ATCTAAGTTT GAAAATTTCA AGAAGGGCAG TGAATTTCTC
AAGGAACCAC TTGCAAGCGA ACTAAAGAAT GAAAGTGATC ATTTTACAAA TGATGCTGTT
CAACTATTGA AATTTCATGG AAGTTATCAA CAAGATAATA GAGAAAACAG AAAGCCTGGC
AAAGGGAAAG ATTGGCAGAT GATGCTTAGG CTAAGAAGTC CTGGGGGAGA AATCCCAGGA
AAACTATTTC TATCTTTAGA TGAATTATCA GACAAACTCG GGAACGGCAC ACTGAGAATA
ACAACTAGAC AAGCCTTTCA AATGCATGGA ATCAGGAAAG ATAATTTGAA GAAAGTTATT
AAATCTATTG TAAATTCAAT GGGCTCAACT TTAGCTGCGT GTGGGGACAT AAATAGAAAT
GTCATGGCTC CTGCCGCACC TTTTGAAACA TCAGAATACA TAACTGCAAG AACTTTAGCC
GTAAAAGTTG CCGATCTCTT AACACCTGTA GCAGGACAAG GAACTTTTTT AGAGCTTTGG
GCTGACGGAG ATTTGGAATA CACTATAAAA CCAGATAAAG AGATTGAAGA GAATAGAAAA
TTACAGTTTA AAGAGAATGT TTTTAGCGGG TCCAAAAAGG AACCTTTATA TGGATCTACC
TACCTCCCAA GGAAGTTTAA ATGTGCTGTC ACCGTTCCTG GCGATAATTC TGTTGATCTT
CTTACTAATG ATATTGGAAT AGTTGCATTC ACTTCTAAAG AAGGGGAATT CGAAGGATGT
AATTTTTATA TAGGTGGAGG TATGGGTCGA ACTCATAATA ATGAAGAGAC CTTTGCAAGA
ATTGCAGATC CACTTGGTTA TGTTGATAAG AAAGATATAT ATGAACTAAT TCAAAGTATC
GTTGCCATTC AAAGAGATTA TGGAGATAGA AAATCAAGGA AAAATTCTAG AATGAAATAC
CTTTTGCATA GAAAAGGTAT TAAATGGTTT AAAAAAATTC TTTTAGATAA ATATTTTAGA
AAAGAAATTA AGCCTTTAAG AAAAGAACCA GAGAATAAAT TAATTGATTA TCTAGGTTGG
CATAAACAAA ATGAAGATTA TTATTTTGTT GGTTTACCTT TATTATCGGG AAGGCTTTAT
GGAAAGAAGA AATCACTAAT AAGAAATATT GTTAAAGAAA ATAATCTTGA TTTAAGACTT
ACACCTAATC AAGATATTTT ACTTTGTAAT ATTCCCAAAA AAAACAAAAG AGAAATTCAA
AAAGCCTTAA AAAGTATTGG ATATGACAAT CTTCATGATA TCAATGAAAT TCAAAGACAC
GCTTTAGCAT GTCCAGCCCT CCCTCTTTGT GGTCTGGCCA TGACCGAAGC CGAAAGAATT
TTGCCTGAAG TTCTCAGTAG AATTGAAAAT TTATTAAATG ATATGAATAT AGAAAAGACG
ATATTGTTCC GCATGACAGG ATGCCCAAAC GGATGTACAA GACCTTATAT GGCAGAACTG
GCTCTTGTAG GGAGTGGGCA AAATAAATAT CAACTATGGT TAGGCGGCAG TAAAAACCTT
CAAAGGTTAG CGAGACCGTA CTTGCAAAGA ATGGATCTCG ATGATTTAGA AAAAACTATT
AAACCATTAC TTGAATTTTG GAAGAAAAGC AATCCAGAAA AAGATTTTGG TGATTTTATA
AATAATGAAA CTGATTCTTC TATTAATAAT TTATTAATAG AATTTGATTA A
|
|---|
| Protein sequence | MIKVEKVKKK KKIEKQETVC LANGLEVSKF ENFKKGSEFL KEPLASELKN ESDHFTNDAV
QLLKFHGSYQ QDNRENRKPG KGKDWQMMLR LRSPGGEIPG KLFLSLDELS DKLGNGTLRI
TTRQAFQMHG IRKDNLKKVI KSIVNSMGST LAACGDINRN VMAPAAPFET SEYITARTLA
VKVADLLTPV AGQGTFLELW ADGDLEYTIK PDKEIEENRK LQFKENVFSG SKKEPLYGST
YLPRKFKCAV TVPGDNSVDL LTNDIGIVAF TSKEGEFEGC NFYIGGGMGR THNNEETFAR
IADPLGYVDK KDIYELIQSI VAIQRDYGDR KSRKNSRMKY LLHRKGIKWF KKILLDKYFR
KEIKPLRKEP ENKLIDYLGW HKQNEDYYFV GLPLLSGRLY GKKKSLIRNI VKENNLDLRL
TPNQDILLCN IPKKNKREIQ KALKSIGYDN LHDINEIQRH ALACPALPLC GLAMTEAERI
LPEVLSRIEN LLNDMNIEKT ILFRMTGCPN GCTRPYMAEL ALVGSGQNKY QLWLGGSKNL
QRLARPYLQR MDLDDLEKTI KPLLEFWKKS NPEKDFGDFI NNETDSSINN LLIEFD
|
|---|
| |