Gene P9515_08211 details

Gene Information

• Locus tag: P9515_08211
• Symbol: typA
• ID: 4719403
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: -
• Start bp: 740166
• End bp: 741968
• Gene Length: 1803 bp
• Protein Length: 600 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640080500
• Product: tyrosine binding protein
• Protein accession: YP_001011137
• Protein GI: 123966056
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.96814
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAACTT CAATTAAAGA TATAAGAAAT GTCGCAATTA TAGCTCATGT AGATCATGGG 
AAAACAACCC TTGTCGATGC ATTATTATCT CAATCAGGAA TTTTTAGAGA TAACGAAGTA 
GTTCCTACTT GCGTAATGGA CTCGAATGAT TTGGAGAGAG AAAGAGGTAT TACAATCCTT 
TCAAAAAATA CAGCTGTTAA TTATAAAAAC ACCCGAATTA ATATTATTGA CACCCCGGGA 
CATGCTGACT TTGGAGGTGA AGTTGAAAGG GTTTTGGGAA TGGTTGATGG TTGTTTATTA 
ATCGTTGATG CTAATGAAGG GCCTATGCCC CAAACAAGGT TTGTATTAAA AAAAGCTTTA 
GAAAAAGGTC TAAGACCTAT AGTCTTCGTA AATAAAATTG ATAGACCTAG AGTAGTTCCA 
GAAATAGCAG TTGATAAAGT TCTTGATTTA TTCCTTGAAT TAGGTGCAGA TGATGATCAA 
TGCGATTTTC CTTATTTATT CGGTAGTGGA TTATCAGGTT TTGCAAAAGA AGAAATGGAG 
TCAAATAATG ATAATATGAT GCCCCTTTTT GAAGCTATTC TTAGGCATGT TCCTCCACCT 
GTAGGTGATT TAAATAAGCC ATTGCAGCTT CAAATTACAA CTTTGGATTA CTCTGATTTC 
TTAGGAAGAA TTGTAATTGG AAAGATTCAT AATGGAACTA TAAAAAATGG TCAACAAGCA 
AGCCTTATAA AAGAAAGTGG AAAAACTATC AAAGGAAAAG TAAGCAAACT TTTAGGATTT 
GAGGGATTGC AAAGAATTGA TATTAATGAA GCTTTTGCCG GAGATATTGT TGCAGTTTCT 
GGTTTCGATG ATGTAAATAT TGGAGAGACC ATAGCTTGTC CTGATTCTCC TCATCCACTT 
CCTTTGATTA AAGTTGATGA GCCTACACTA AATATGACAT TTGTCGTAAA TGATTCTCCA 
TTTGCTGGCA AAGAAGGGAA ATTTGTTACA AGCAGACAAT TAAAAAATAG ATTAGAAAGA 
GAATTATTAA CTAATGTAGC CCTAAGAGTT GAAGAAACAG ATTCACCAGA TAGATTTTCT 
GTCTCTGGGA GAGGCGAACT GCATTTAGGG ATTTTGATAG AAACAATGAG AAGAGAGGGC 
TTTGAATTCC AAATATCGCA ACCGCAAGTT ATTTTTAGAG AGATTGATAA TGTTCAATGC 
GAACCTATAG AAACATTAGT TTTAGATGTT CCAGAAGCCG CAGTTGGTTC TTGCATTGAA 
AAACTTGGTT CAAGAAAGGC TGAGATGAAA AACATGCAGA CAAGTTCAGA TGGAAGAACA 
CAACTAGAAT TTCTTGTGCC ATCAAGAGGT CTTATAGGCT TTCGTGGGGA ATTTGTGAGA 
ATAACTAGAG GGGAAGGAAT TATGAGCCAC TCATTCTATG AATATAAACC TAAAGCTGGA 
GATTTTGAGA CAAGAAGAAA TGGTGTACTT ATTTCCTTTG AAGAGGGTGT TGCTACATTC 
TATGCTTTAA AAAATGCAGA AGATAGAGGT GTTTATTTTA TTAAACCGGG AGCAAAGGTT 
TATAAAGGTA TGATTATTGG CGAGAATAAT AGATCACAAG ATTTAGAGTT AAATATTTGC 
AAAACAAAGC AACTGACAAA CATGAGATCT GCAGGAGCAG AAGAATTGGA TACTTTACAA 
TCTCCTGTAG ATATTACACT TGAGAGAGCG CTTGAATATA TAGGTCCCGA TGAAATGTTA 
GAAGTAACGC CTGATTCAAT AAGAATGAGA AAATTAAATA AGAAAAAGGC CTTAAAAAAA 
TAG 

 

Protein sequence

MSTSIKDIRN VAIIAHVDHG KTTLVDALLS QSGIFRDNEV VPTCVMDSND LERERGITIL 
SKNTAVNYKN TRINIIDTPG HADFGGEVER VLGMVDGCLL IVDANEGPMP QTRFVLKKAL 
EKGLRPIVFV NKIDRPRVVP EIAVDKVLDL FLELGADDDQ CDFPYLFGSG LSGFAKEEME 
SNNDNMMPLF EAILRHVPPP VGDLNKPLQL QITTLDYSDF LGRIVIGKIH NGTIKNGQQA 
SLIKESGKTI KGKVSKLLGF EGLQRIDINE AFAGDIVAVS GFDDVNIGET IACPDSPHPL 
PLIKVDEPTL NMTFVVNDSP FAGKEGKFVT SRQLKNRLER ELLTNVALRV EETDSPDRFS 
VSGRGELHLG ILIETMRREG FEFQISQPQV IFREIDNVQC EPIETLVLDV PEAAVGSCIE 
KLGSRKAEMK NMQTSSDGRT QLEFLVPSRG LIGFRGEFVR ITRGEGIMSH SFYEYKPKAG 
DFETRRNGVL ISFEEGVATF YALKNAEDRG VYFIKPGAKV YKGMIIGENN RSQDLELNIC 
KTKQLTNMRS AGAEELDTLQ SPVDITLERA LEYIGPDEML EVTPDSIRMR KLNKKKALKK