| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_08091 |
|---|
| Symbol | ilvD |
|---|
| ID | 4719391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | + |
|---|
| Start bp | 728392 |
|---|
| End bp | 730071 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640080488 |
|---|
| Product | dihydroxy-acid dehydratase |
|---|
| Protein accession | YP_001011125 |
|---|
| Protein GI | 123966044 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
|---|
| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.287074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT TAAGATCTTC TGCAATAACT CAAGGTGTTC AAAGATCTCC TAACAGATCA
ATGTTAAGAG CAGTTGGATT TAGTGATGAT GATTTCACTA AACCAATCAT TGGAGTCGCT
AATGGATATA GCACCATTAC ACCCTGCAAT ATGGGCCTTA ACAAGTTAGC TCTTAAGGCA
GAAGATTCAA TAAGGAAATC AGGAGGAATG CCTCAAATGT TCGGAACTAT CACCGTAAGC
GATGGGATCT CCATGGGAAC AGAAGGAATG AAATATTCTT TAGTTTCAAG GGAAGTAATA
GCCGATTCAA TAGAAACTGC CTGTAATGCG CAAAGTATGG ATGGTGTTTT AGCTATTGGT
GGTTGTGATA AAAATATGCC GGGTGCAATG ATAGCAATTG CAAGAATGAA TATCCCTTCC
ATATTTATTT ATGGAGGAAC AATAAAACCT GGAAAGTTAA ACGGTGAAGA CTTAACGGTT
GTCAGTGCAT TTGAAGCTGT TGGGCAATTA ACCTCGGGTA AAATAAATGA GAAGAGATTA
AATGAAGTTG AGAAAAATTG TATTCCAGGA GCAGGAAGTT GTGGAGGAAT GTTCACAGCT
AATACTATGT CAGCAGTTAT AGAAGTCTTA GGTTTAAGTC TTCCTCATAG TTCAACAATG
GCAGCCGAAG ATTATGAGAA GGTGGTAAGT GCTGAAAAAA GCGCTGAAAT ACTTGTAGAT
GCAATAAAAA AAGATATAAG GCCACTAGAT CTTATGACTA AAGAATCTTT TGAAAATGCA
ATATCTGTAA TTATGGCTAT TGGAGGTTCG ACAAATGCAG TGCTTCACAT ATTAGCGATA
GCGAATACTG CAGGTATAGA GATCAATATT GATGATTTTG AAAGAATAAG ACAAAAAGTT
CCTGTGATTT GTGATTTGAA ACCTAGCGGC AGATATGTCA CAGTAGATCT TCATAATGCA
GGAGGCATTC CACAAGTAAT GAAAATACTT TTAAATGCAG GATTAATAAA TGGTGATTGC
AAAAATATCG AAGGTAAAAC AATATCTGAA TATTTACTTA ATATTCCAGA TAATCCTCCT
GAAAATCAAA ATGTTATTAG AAACATAAAT AATCCTCTTT ATAAAAAAGG TCATTTAGCA
ATATTAAAAG GTAATTTAGC TTCGGAAGGT TGTGTAGCAA AAATCAGCGG AGTAAAGAAT
CCAGTTTTAA AGGGTCCCGC TCGAATTTTT GAAAGTGAGG AAGATTGTCT TAAATCAATT
TTGAATAATG ATATTAAAGC TGGTAATGTT GTCGTTATAA GAAATGAAGG TCCTGTGGGA
GGACCGGGAA TGAGAGAAAT GTTAGCTCCA ACATCTGCAA TTGTTGGGCA AGGGCTGGGA
GAAAAAGTAG CTTTAATAAC TGATGGTAGA TTTAGTGGAG GTACCTATGG CCTTGTTGTT
GGACATATCG CACCAGAGGC AGCAGTAGGA GGGAATATAG CTTTAATAAG AGAGGGAGAT
TTAATCACTG TTGATGCTGT AAACCAATTA ATTGAAGTTG AACTATCTGA TGGGGAATTA
GAAAAAAGAC GAATTAACTG GATAAAGCCT ATTCCGAAAT ATAAGAAAGG TGTACTTTCA
AAATATTCAA GAATTGTAAG TACTTCAAGC TTAGGTGCAG TTACAGATCT GGAAAAATAA
|
|---|
| Protein sequence | MNKLRSSAIT QGVQRSPNRS MLRAVGFSDD DFTKPIIGVA NGYSTITPCN MGLNKLALKA
EDSIRKSGGM PQMFGTITVS DGISMGTEGM KYSLVSREVI ADSIETACNA QSMDGVLAIG
GCDKNMPGAM IAIARMNIPS IFIYGGTIKP GKLNGEDLTV VSAFEAVGQL TSGKINEKRL
NEVEKNCIPG AGSCGGMFTA NTMSAVIEVL GLSLPHSSTM AAEDYEKVVS AEKSAEILVD
AIKKDIRPLD LMTKESFENA ISVIMAIGGS TNAVLHILAI ANTAGIEINI DDFERIRQKV
PVICDLKPSG RYVTVDLHNA GGIPQVMKIL LNAGLINGDC KNIEGKTISE YLLNIPDNPP
ENQNVIRNIN NPLYKKGHLA ILKGNLASEG CVAKISGVKN PVLKGPARIF ESEEDCLKSI
LNNDIKAGNV VVIRNEGPVG GPGMREMLAP TSAIVGQGLG EKVALITDGR FSGGTYGLVV
GHIAPEAAVG GNIALIREGD LITVDAVNQL IEVELSDGEL EKRRINWIKP IPKYKKGVLS
KYSRIVSTSS LGAVTDLEK
|
|---|
| |