| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_07491 |
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| Symbol | ispG |
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| ID | 4719501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 677928 |
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| End bp | 679145 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640080428 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001011065 |
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| Protein GI | 123965984 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.539709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTAA CTCAATCAAA AGAGGTGAAT AGTCTCTCAA GAAGATATTC AACTCATATT
GAGAGAAGGA TTACTAGAAC TGTAATGGTT GGAGATATTG CAATTGGTAG TGACTATCCA
GTAAGAGTTC AGTCAATGAT AAATGAAGAT ACTATGGATG TGGATAATGC TTACTTAGCC
ATTAAAAGAC TTCACGATGT GGGCTGTGAA ATCGTAAGAC TTACTGTCCC TTCTCTAGCT
CATGCAAAAG CTGTTGGAGA TATTAAAGAA AAATTAATTA AAAGTAATAT AAATACACCA
CTAGTCGCAG ATGTTCATCA CAATGGAATG AAAATTGCAA TGGAGGTTGC AAAACATGTT
GATAAAGTAA GGATTAATCC AGGATTGTTT GTTTTTGAGA AATCAGATCC TACAAGAACT
AAATATACTG ATGCAGAATT TGAGACTATT AAAAATACAA TCCTAAAAAG ATTTACTCCA
CTTGTAGAAG TTTTGAAGTC GAAAAATAAA GCTCTAAGGA TCGGAGTTAA TCATGGTTCT
TTATCCGAGA GAATGCTTTT TACTTATGGG GATACACCTT TAGGAATGAC AGAATCTGCA
ATGGAATTTG TAAAAATTTG CGATGAACTT GATTTTCATA ATATTATTAT TTCTATGAAG
GCTTCAAGAG CACCAGTAAT GTTGGCAGCA TATAGGATGA TTTCAGATAG ATTGGATGCA
GAAGGATATA ACTACCCTTT GCATTTAGGC GTCACTGAAG CTGGAGATGG AGATTATGGA
AGAATTAAGA GTACTGCAGG TATAGGAACA CTCCTTGCAG AGGGTCTTGG AGATACTATA
AGAGTCTCAT TAACTGAAGC TCCTGAAAAG GAAATTCCAG TATGCTATTC AATTTTGCAA
TCCTTAGGAT TAAGAAAAAC AATGGTTGAA TATATAAGTT GTCCTAGTTG CGGAAGAACT
CTTTTTAATC TCGAGGAAGT TGTAGATAAA GTTAGGAATG CTACCTCTCA TTTAACTGGT
TTAGATATTG CAATAATGGG TTGTATTGTG AACGGACCTG GAGAAATGGC AGATGCTGAT
TATGGCTACG TAGGGAAAGG AAAAGGGACA ATTGCTCTTT ACAGAAGGAA AGAAGAGATA
AAAAGAGTAC CTGAGGATGA GGGGGTTGAT GCTTTAATTA GACTTATTAA AGAAGATGGG
AAATGGATTG ATCCTTAA
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| Protein sequence | MSLTQSKEVN SLSRRYSTHI ERRITRTVMV GDIAIGSDYP VRVQSMINED TMDVDNAYLA
IKRLHDVGCE IVRLTVPSLA HAKAVGDIKE KLIKSNINTP LVADVHHNGM KIAMEVAKHV
DKVRINPGLF VFEKSDPTRT KYTDAEFETI KNTILKRFTP LVEVLKSKNK ALRIGVNHGS
LSERMLFTYG DTPLGMTESA MEFVKICDEL DFHNIIISMK ASRAPVMLAA YRMISDRLDA
EGYNYPLHLG VTEAGDGDYG RIKSTAGIGT LLAEGLGDTI RVSLTEAPEK EIPVCYSILQ
SLGLRKTMVE YISCPSCGRT LFNLEEVVDK VRNATSHLTG LDIAIMGCIV NGPGEMADAD
YGYVGKGKGT IALYRRKEEI KRVPEDEGVD ALIRLIKEDG KWIDP
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