| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_07011 |
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| Symbol | mscS |
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| ID | 4719517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 635067 |
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| End bp | 636098 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640080379 |
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| Product | small mechanosensitive ion channel |
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| Protein accession | YP_001011017 |
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| Protein GI | 123965936 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.184839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT TTACAGAAAA ATTGATTTTG GCAATTTCGA TATTTCTTAT TGGAATAATA
ATATCGATCA TAATATCTAA AATTTCCAAG GTTATTTTTA AAAGGATTTC TAAAAGAACA
AAAACAAATT TCGATGATTT TATTTTTGAT ACAATTAATG GAGTTTTAAA GCCAATAGGT
TTTCTTCTAT CAGGCTATTT CTCAATTGAT TATTTTTTCA CTGATGAAAT AACTTTTATA
TCTGTAATCT TAAATATTCA AAAATTACTG ATATTAATAA TCATTATTAA AGCTCTTAAT
AAAGTACTAA TTAAATCTTT AACAGAATCC ACTGCAAAAA TTGATGATTC TTCAATCAGT
TCGATGATCT CATCATTAAC ACCTTTAATT AAAGCATTTA CATGGACTAT AGGATCTATA
TTTTTCTTGC AAAATATAGG TGTGAAAATG ACTGCGATTT GGGCATTGCT TAGTGCAGGC
GGTATCGGGG CAGGTTTAGC ATTAAAAGAT CCAGTTCAAG AATTTTTTGA ATACATAACA
ATTTTGCTTG ATAAACCTTT TCAAAAAGGT GAATTTATAA AGTCCGATAG CGTATTAGGA
ATGGTAGAAA GGGTAGGAGT AAGATCCTCA AGAATAAGAA GTATCAACGG AGAAGTAGTA
GTAATGAGCA ACAGTGCATT AACTAATGGG ATAATTTCAA ATTATGCTCA AATGAAGAAA
AGAAGACTTG TTCATAAATT GGGCGTAGTT TATGAAACCT CTCCATCTCT AATGAAAATG
ATTCCAAATA TTATAAAAAA AATTATTGAA GAAACTAAAG ATGCCTCTTT TGATAGATGT
CACTTTACAG ATTTCGGAGA CTTCAGTCTA AATTTCGAAT TAGTTTATTT CATACCAACA
AATAATTATT TAGCTGCTAT GGAAGCTCAA CAAAGTATTA ACTTACGAAT TATTGAAGAA
TTCTCCGCTA ACAAAATAGA ATTTGCATTC CCAACTCAAA CATTAAATAT TGAGAGATAC
GAACCCAAAT GA
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| Protein sequence | MKVFTEKLIL AISIFLIGII ISIIISKISK VIFKRISKRT KTNFDDFIFD TINGVLKPIG
FLLSGYFSID YFFTDEITFI SVILNIQKLL ILIIIIKALN KVLIKSLTES TAKIDDSSIS
SMISSLTPLI KAFTWTIGSI FFLQNIGVKM TAIWALLSAG GIGAGLALKD PVQEFFEYIT
ILLDKPFQKG EFIKSDSVLG MVERVGVRSS RIRSINGEVV VMSNSALTNG IISNYAQMKK
RRLVHKLGVV YETSPSLMKM IPNIIKKIIE ETKDASFDRC HFTDFGDFSL NFELVYFIPT
NNYLAAMEAQ QSINLRIIEE FSANKIEFAF PTQTLNIERY EPK
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