Gene P9515_06981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_06981 
Symbol 
ID4719514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp631867 
End bp632574 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content31% 
IMG OID640080376 
Productshort-chain dehydrogenase/reductase 
Protein accessionYP_001011014 
Protein GI123965933 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACTA TACTAATAAG CGGAGCCAAC AGAGGGATAG GTTTAAATAT TGCACATAGA 
GAATTAAAAG CAGGAAATAG AATTAGCATT GGAATTAGAG ATTTAGAATC TATTAAAGGG
AGCGTTATTG ATCCAAATAA TTGGCGCAAA GATAAAATTC TTATTAATAA ATACGACGCA
TTAGATAAGT TATCTGCCGA AAAATGGATT AAAAATACGA TCTCTAATTT TGGAGGTTTT
GATTCATTAA TAAATTGCTC TGGGATACTT TCAAAAATTC CTTTTTTATA TAAAGATGGG
GATGAAAAAG AAATTTTGAA TACTTTAAAT ATAAATTTTT TAGCTATTTG GAATCTATGC
AGACTGTCTT GGGAACACTT AAGTAAATCT AATAATGGAA GAATTATAGT TTTAGTCTCA
ATGAGTGGCA AAAGGTCTAA AGGAGATTTA GCTGCATATT CCGCATCTAA ATTCGCGTTG
ATGAGTCTTT GCCAAACAAT AAAGAACAAA GGTTGGGAAG AAAATATTAG GGTTACGGCT
ATCTGTCCTG GTTGGGTTAA TACAGATATG GCTGAGAAGA TTTCATCATT AGAAAAGTCA
AAAATGACTC AACCAAATGA TATCGCTGAG ATCTGTTCTA CTATATTGAA ATTACCAATG
CAGTCAGTTC CTTTTGAAAT AGCTTTAAAT TGTAATCATG AAATTTAA
 
Protein sequence
MRTILISGAN RGIGLNIAHR ELKAGNRISI GIRDLESIKG SVIDPNNWRK DKILINKYDA 
LDKLSAEKWI KNTISNFGGF DSLINCSGIL SKIPFLYKDG DEKEILNTLN INFLAIWNLC
RLSWEHLSKS NNGRIIVLVS MSGKRSKGDL AAYSASKFAL MSLCQTIKNK GWEENIRVTA
ICPGWVNTDM AEKISSLEKS KMTQPNDIAE ICSTILKLPM QSVPFEIALN CNHEI