Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_06811 |
Symbol | amiC |
ID | 4719559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 617801 |
End bp | 618895 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640080359 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_001010997 |
Protein GI | 123965916 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.197381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGTCAA AGTTTTTTTT TAATAAACTT TTTCGCTGCC TATCAATATT TTTACTTTTT AATTCAAGTA TTTCTCCAGC CAGATCATCT AGTGCACTAG CTGCATGGAG TTTAAATTCT AATGGAGTTT TAGAATTAAG GACTAAATCA AATTCAAAAT TAAAGGCCTA CTTTCAAAAA GGAGGGAAAA ATTTTGGGGA TAGATTTTGG ATAGATTTCC CTGGGGAACT TCAAACTCCG AGAACTATAG AGGGAAATGG TCCAATAAAA GAAATTAGAT TGGGCAAACC AATTAAAGGC AAAACTAGAT TAGTAGTTGA ATTTTCTGCT GATAATAATA ATTTGAAACC TCTTAGTTGG AGGCTAGTAG GTATAGATCA AAACACATGG AAAATTAAAT TATTTTCTTT ACCAAAAAAT TCATTTCAAA CAATTGGTGA AGGTCTTGTT AGTAAATCGA GAATTAATCT TAAGGCTAAT AAAAAGCTAA TTAAACCAAG AAAAACAAAT TATGAGTTTT TGCAATTGCC GGATATTGAG AGAAATAAGT TTTATGTTGT TTTAGATCCA GGCCATGGTG GCCCAGATCC AGGAGCAATC GGTATAGGGG GGGTAAAAGA AGCAGATGTG GTCCTTGATG TTTCTAAAAG AGTTAGAAAT TTATTATCTA AAAAAGGTGT AAATGTAAGA ATGACGAGAA ATAAAGAAGT TGATTTGGAT TTACCTCCAA GAGTCTCAAT AGCTAATAGG ACTAATGCTG ATGTTTTTGT GAGCATTCAC GCTAATGCCT CAAGAGGTAA AAGAAGAGAT ATTAATGGAT TAGAAACTTT TTATTACACG GGATGGAGGG GCAGACTATT AGCCAAAAAA ATTCAAAAAC AAATCCTTAA AGTTTCACCT GGAAGTCCAG ATAGAGGCGT AAGACAGGGG AGATTTTTCG TTATTAAAAA TACTAGAATG CCAGCAGTTC TTGTAGAAAT AGGTTTTTTA ACAGGAAGAT TAGATGCGAG AAGGTTAGAA AAATCTATTC ATCGTGAAAG AATAGCTTAT GCAATTACAA AAGGTATTCT TGAATATCTT TCTAAGGCAG GGTGA
|
Protein sequence | MMSKFFFNKL FRCLSIFLLF NSSISPARSS SALAAWSLNS NGVLELRTKS NSKLKAYFQK GGKNFGDRFW IDFPGELQTP RTIEGNGPIK EIRLGKPIKG KTRLVVEFSA DNNNLKPLSW RLVGIDQNTW KIKLFSLPKN SFQTIGEGLV SKSRINLKAN KKLIKPRKTN YEFLQLPDIE RNKFYVVLDP GHGGPDPGAI GIGGVKEADV VLDVSKRVRN LLSKKGVNVR MTRNKEVDLD LPPRVSIANR TNADVFVSIH ANASRGKRRD INGLETFYYT GWRGRLLAKK IQKQILKVSP GSPDRGVRQG RFFVIKNTRM PAVLVEIGFL TGRLDARRLE KSIHRERIAY AITKGILEYL SKAG
|
| |