| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_06721 |
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| Symbol | menD |
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| ID | 4719550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 606945 |
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| End bp | 608711 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640080350 |
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| Product | menaquinone biosynthesis protein |
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| Protein accession | YP_001010988 |
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| Protein GI | 123965907 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCAT CTATTGAATG CCAAAATATT TTTAGAAGTT TACAACTTTT AGATCTTTTT
ATAAAGATAG GAGTTAAAAA TTTAATTTTA TGTCCGGGAA GTCGATCAGC CCCTTTAGCA
ATAGCAGCAG GAGAGTTATA TAAATATGGA ATTTTAAATG TATTTAATTC GATAGACGAA
AGATCTGCTG GATTTCATTC ACTTGGAATT TCTACTGCTT CGGGAGATAT TTCATTAGTT
GTTACGACAT CAGGGTCTGC CGTTGGAAAC TTATTGCCTG CGGCCGTTGA GGCAGATAGA
TCCTGTAAAT CAATCGTATT TATAACTGCT GATAGACCCT TAAGGTTAAA AAATTGTGGT
TCTAATCAAA CAGTAAATCA AGAAGCATTT CTGAATTCAG TTTGCAGAAG TACTTTGAGC
ACGAACTTAA ATGGAATTCA TAAGAATAAT GACGATGATA TTTTGAAAAT AGTAAAAATG
ATAAAAAAAC AATTGCTCCA ATCGCCTGGC CCTATTCATT TAAATATTCC TTTTGAAAAA
CCTCTAGATA TTTCTCTAAA AAATAAAAGA AAGACTTTAA AGGTTTTTGA AACACTTTAT
TTGAATAAAA CCTGTAAATT TTTAAAACAA AATGAACAAA ATAAAAGTAT TCATTTTTCT
AAAAGAATTT TTGAAAGTTT AGATTTGTCT AACTCAGGAA TAATTATTGT TGGTCCGTAT
CAGGGATCGA TAAAAGATTT AGTTTCCTTT AATAATTCTT TAGAAAAAAT ACAATCAATT
ACAGGCTGGC CCGTTTTTGC TGATCCTGTG TCAGGCGTAT CAGCTGACTT GAGAGGATTA
GTAGAAAATT GGGAATTAAT TATTAAAAAA AATAATAACG TTATCAAATG TAATCAGATT
TTGAGACTAG GTCCTCTTTC CTCCTCAAAC AATTTAGAGA AATTTTTATC AGATTTTGAT
GGCATACAAA TTCTTGTCAA AGAAAATAAT AGAAGAAAAC TAGATCCTAT AAAAAAATCT
TTAGAATATG AATTTGGCTT AACTAATTTT GTTAATCAAC TTTTAGGAAC CTATTCAGAT
GATCAAAAAA AGAAGAAACC TCTAATTAAT TTGGTAAAAG TTTTGAGGAG AGAAGGACAA
AAAATTAGCA AAATTTTAAA TGAACAAATT TTTTTAAATA AAGAAATAAC AGAATATAAA
CTTGCAAATT TTGTACCTAA AATTTGGCCA GAAAACTATC CTATTATGCT TTCAGCAAGC
AGTCCTATTA GAGATTGGCT TACATTCTCT GAAAATGGAA CTTTAACAAG GAAATGTTTT
AGCTTTAGAG GGGCTTCAGG GATAGATGGG ACTTTATCTC TTGCATTAGG AATCGCTAGA
ATTACTCAAC CTTTACTTTT GGTTACTGGG GATTTAGCCT TAATTCATGA TATAAACGGT
TTCCTTATTG AAAATTCAAT TGATTTAAAT CTGACAGTTC TATTAATAAA TAATAATGGT
GGAAATATAT TTAATAATTT ATATAAAAAT AATTTAGAAA AAGAAGAATT AAAGAAACTT
TTTTTAATGC CTAAATCTAT CAACTGGGAA AACCTTGCGA AAGCTTTTCA AGTGCCAATT
AAAATTGTTT CAGATTTAAA TAAATTACCA GAATCTTTTG AATGGAGCCT TTCTATGCAA
AAATCAGTAA TAATTAAAGT CGATATTAAT GTTGATAATG AAATGAAAGA AAGAAGTTTA
ATCTTAAAAA AAATCCTCAA TAATTAA
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| Protein sequence | MTSSIECQNI FRSLQLLDLF IKIGVKNLIL CPGSRSAPLA IAAGELYKYG ILNVFNSIDE
RSAGFHSLGI STASGDISLV VTTSGSAVGN LLPAAVEADR SCKSIVFITA DRPLRLKNCG
SNQTVNQEAF LNSVCRSTLS TNLNGIHKNN DDDILKIVKM IKKQLLQSPG PIHLNIPFEK
PLDISLKNKR KTLKVFETLY LNKTCKFLKQ NEQNKSIHFS KRIFESLDLS NSGIIIVGPY
QGSIKDLVSF NNSLEKIQSI TGWPVFADPV SGVSADLRGL VENWELIIKK NNNVIKCNQI
LRLGPLSSSN NLEKFLSDFD GIQILVKENN RRKLDPIKKS LEYEFGLTNF VNQLLGTYSD
DQKKKKPLIN LVKVLRREGQ KISKILNEQI FLNKEITEYK LANFVPKIWP ENYPIMLSAS
SPIRDWLTFS ENGTLTRKCF SFRGASGIDG TLSLALGIAR ITQPLLLVTG DLALIHDING
FLIENSIDLN LTVLLINNNG GNIFNNLYKN NLEKEELKKL FLMPKSINWE NLAKAFQVPI
KIVSDLNKLP ESFEWSLSMQ KSVIIKVDIN VDNEMKERSL ILKKILNN
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