Gene P9515_06621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_06621 
SymbolthrS 
ID4719540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp597283 
End bp599199 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content32% 
IMG OID640080340 
Productthreonyl-tRNA synthetase 
Protein accessionYP_001010978 
Protein GI123965897 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.296705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAAA TAACACTCCC TGATGGTACT AAAAAAGTTT TCGAAAAAGC TGTAACTACT 
CTTGATATTG CTAAAAGTAT TGGAGCAGGG TTAGCCAAAG CAACAATTGC GGGGAAAGTA
AATAACGTTC TTTTTGATGC AACTCTGCCA ATAAAAAATG ATTCTAAAGT GGTAATAATT
ACATCACGAG ATAAGGAGGG TATTGAGATA ATTAGACATT CTTTTGCTCA TTTAATTGGT
CATGCCGTTA AACAAATATA TCCAAATATA AAAATGGCTA TTGGTCCAGT AATTGAGGAT
GGATTTTATT ATGATATTTT TTCAGAATAT AGGTTTACTC CTGAAGATTT AATCAAAATT
GAAGAAAGAA TTAATCAACT CATTAGAAAG GATTATGACG TTGAAGTTTT GCAAGTTTCA
AAACAAGAAG CTATTAAAAC TTTTAAAGAA AGAGATGAGA TTTTCAAATT AAGAATTATT
GAAGAAATCG ATGAAAAAGA TTCAATAAAT TTATATAAAC ATGAAGAATA TATTGATATG
TGCAGAGGAC CTCATGTCCC AAACACAAGA CATCTTAGAC ACTTTAAGTT ATTAAAATTA
TCCGGATCAT ATTGGAGAGG TGACAGCAAA AACGAATCAT TGCAAAGAAT TTATGGTACA
GCGTGGAGCA AGGAGAAGGA TCTTACTAAT TATCTAAAAA GAATTGAAGA AGCCGAAAAA
AGAGACCATA GAAAACTAGG CAAAAAACAT TCTCTTTTTC ATATACAAGA AGAATCTCCC
GGAATGATTT TTTGGCATCC AAATGGTTGG ATAATTTATC AAATCCTTGA AAAATACATA
AGAGAAATTC TCAGAAAAAA TGAATATCTC GAAATTAAAA CACCCCAAGC AGTTGATAAA
TCTCTTTGGG AAAAATCAGG TCACTGGGAA AAATTCAGAG ATGATATGTT CACTACTGCC
TCTGAGAATA GAACTTATGC AATTAAGCCG ATGAACTGTC CTTGCCATAT TCAAGTATTT
AATCAAGGGT TGAAAAGTTA TAAAGATTTA CCTCTGCGTC TGGCTGAATT TGGATCTTGC
CACAGAAATG AGCCTTCAGG AGCCTTGCAC GGTTTGATGA GAGTTAGAAA TTTCACTCAA
GATGATGCTC ATATATTTTG TACTGAAGAG CAAATTCAAG AAGAGGTCTC AACTTTTATT
GATCTAGTTT TTGAGGTTTA TAATACTTTT GGATTTGATG AAATTATCAT AAAGTTATCA
ACCCGTCCAG AAAAAAGAGT AGGGAGTGAG GATATTTGGG ACAAATCTGA GGAAGCTCTA
ACCGAAGCTT TAAATAATAA AAATCTCAAA TGGGAACTCC AACCAGGGGA AGGAGCATTT
TATGGTCCAA AAATTGAATT TTCACTTAAA GATTGTCTTA ACAGGATATG GCAATGTGGG
ACGATTCAGG TTGATTTTTC GATGCCTGTT CGATTAGATG CGACTTTTGT AGACATTAAT
AACGAGAAAA AAAGTCCCGT CATGTTGCAT AGAGCAATAT TAGGTTCTTT TGAGAGATTT
ATAGGAATAT TGATAGAACA ATACGAAGCT AAATTCCCTA TTTGGCTAGC TCCAACTCAG
ATTATTTTAT TAAGTATTAC TGAAAGAAAT ATAAAAAAAT GTATTGAATT TAATAATTTA
TTAAATACTA AAGGATATCG ATCAAAAATT GATATTAGAA ACGAAAAGAT TGGTTATAAA
ATTAGAGAAT CTACGCTGGC CAGAATACCA TTAATTGGTA TTGTTGGAGA CAAAGAGCAG
GAACTAAATT CAGTTACCTT GAGAGCTTTA GATGGATCGA ATTTAGGAAT TTATGAATTA
GATAATCTTT TTAAACTTAT GAATACTTTA ATTGAGAAAA AGGGAAGAGT AGACTAA
 
Protein sequence
MPKITLPDGT KKVFEKAVTT LDIAKSIGAG LAKATIAGKV NNVLFDATLP IKNDSKVVII 
TSRDKEGIEI IRHSFAHLIG HAVKQIYPNI KMAIGPVIED GFYYDIFSEY RFTPEDLIKI
EERINQLIRK DYDVEVLQVS KQEAIKTFKE RDEIFKLRII EEIDEKDSIN LYKHEEYIDM
CRGPHVPNTR HLRHFKLLKL SGSYWRGDSK NESLQRIYGT AWSKEKDLTN YLKRIEEAEK
RDHRKLGKKH SLFHIQEESP GMIFWHPNGW IIYQILEKYI REILRKNEYL EIKTPQAVDK
SLWEKSGHWE KFRDDMFTTA SENRTYAIKP MNCPCHIQVF NQGLKSYKDL PLRLAEFGSC
HRNEPSGALH GLMRVRNFTQ DDAHIFCTEE QIQEEVSTFI DLVFEVYNTF GFDEIIIKLS
TRPEKRVGSE DIWDKSEEAL TEALNNKNLK WELQPGEGAF YGPKIEFSLK DCLNRIWQCG
TIQVDFSMPV RLDATFVDIN NEKKSPVMLH RAILGSFERF IGILIEQYEA KFPIWLAPTQ
IILLSITERN IKKCIEFNNL LNTKGYRSKI DIRNEKIGYK IRESTLARIP LIGIVGDKEQ
ELNSVTLRAL DGSNLGIYEL DNLFKLMNTL IEKKGRVD