Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_06491 |
Symbol | glgB |
ID | 4719658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 580124 |
End bp | 582388 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640080327 |
Product | glycogen branching enzyme |
Protein accession | YP_001010965 |
Protein GI | 123965884 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.930927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA CTATTCAAAC AGACTGGATT AAATCAGAAG CTTTCAACCT CGAAAATTGT TGCAATGATA ATCCATTAAA TATTTTAGGT CCCCATTTCT TCAAAGGGAA GTGGGTTACA AGAGTATGGA TGCCAGAGGC AGATGAAGTA AATATTACTT TTAAGGATAA AACCTATAAA ACAACTACTC CCAATCATAA ATGGATGTTT GAGGCAATTC TTCATGAAGA CCCAAAAAAT AATTATCAAA TAAATGTATT GAGAGGAGGA GTTTCTCATT CACAACAAGA CCCATGGGCT TTTAAGGATG AATGGATGGG GGAGGTCGAT AGGCACCTTT TTGCAGAGGG TAATCACCAT CATATTTGGA AGAAAATGGG TGCCCATATC AGTGAAGATA TAAATCAAAA AGGTGTAATG TTCTGTATTT GGGCACCAAA TGCAAAATCA ATCTCAATAA TCGGAGATAT AAATTCTTGG GACGGTAGAC ATCATCCTAT GCAAAAAAGG CTGGGTGGAG TTTGGGAATT ATTTATGCCA ATATTGAAGG AAGGAGATGT TTATAAATAT GAAATAAGAA CTCAACAAGG GCATATTTAT GAAAAAGCAG ACCCATATGG TTTTCTTCAT GAAGTAAGGC CCCAAAATGG CTCAATAATA TCTAAACTCA ACAACTTCAA TTGGGAAGAT AGTTCTTGGA TCACTAGTAG AGATTCATCA AGTCAAATTA ACAAACCTAT TTCAGTTTAT GAGATGCATC TTGGAAGTTG GATGCATGAT TCAACCGATA ATAAGTATAT TGAAAAAAAT GGCAACCCAA GACATCCAGT ACCCGCAGCA GATTTAAAGC CTGGGACAAG GTTTTTAACT TATCCTGAAT TAACCGAAAA GCTTATCCCA TATGTGAAAG AAAGAGGATT TACTCATATC GAATTAATGC CTATTTCAGA ACATCCTTTT GATGGTTCAT GGGGATATCA AGTTACAGGT TGGTATGCCC CAACAAGTAG ATATGGAACT CCAAATGAAT TTAAAGAGTT TATAAATAAA TGCCATGCAG AGGGCATAGG TGTCATTCTA GACTGGGTTC CTGGCCATTT CCCAAAAGAT AAACATGGTT TAGCTTTCTT TGATGGTTGT CATCTTTATG AGCATGGTGA TCCTCGTATT GGAGAACATA AAGAATGGGG AACTTTAATT TTTAACTACA GTAGAAATGA AGTAAGGAAT TTTTTAGTAG CAAATCTTAT TTATTGGTTT GAAGAATTTC ATATTGATGG AATAAGAGTA GATGCTGTAG CTTCAATGTT ATACAGAGAT TATTTACGTC CAGAAGGAGA ATGGATTCCA AATGAAAATG GTGGAAATGA AAATTTAGAA GCTGTTAAAT TTCTTCAGCA AGCAAATCAT GTCCTTTTTC AACATTTCCC GGGAGCACTA TCTATTGCTG AAGAATCCAC TACTTGGCCA ATGGTTACAG AGCCAACAAA TGTAGGAGGT TTAGGTTTCA ATTTAAAGTG GAATATGGGG TGGATGCACG ATATGCTCGA TTATTTTGAA ATAGACCCTT GGTTTAGACA ATTTCATCAA AATAGCGTGA CCTTTTCGAT AACTTATAAC TATACCGAAA ATTTTATGCT TGCTCTTAGC CATGATGAGG TTGTTCATGG GAAAAGTCAC CTTCTACATA AAATGCCAGG AGATGATTGG AAAAAATTTG CGAATACAAG AGCTTTATTA ACTTATATGT GGACACATCC TGGTAAAAAG ACAATTTTTA TGGGAATGGA ATTTGGACAA AGGCAAGAAT GGAATGTTTG GGATGATCTT CAATGGGAAC TTCTAGAATA TGAACCCCAC AAAGGTATTA GAAACCTTAT TGATGACTTA AATAAACTTT ATAAAAATGA GCCATCTTTA TGGAAAAATG ACTTTGATCC TTATGGATTT CAATGGATAG ATTGCGATGA CACCTCTAAT TCAGTTATTA GTTTTATGAG AAGGGAAAAT GAAAGTAATG AATGGCTTGT GGTTATAGCA AACTTTACCC CTAATTTTCA CGAATCATAT AAGATAGGTG TTCCATTAGA AGGATACTAT AAGGAGATTT TTAATTCAGA TGGATCTAAA TATGGAGGAA GTAACAAAGG GAATATGGGA GGTAAGGACA CCCTAAAATA TAATATTCAC AATTATGAAA ATGCTCTTGA AATTGCTCTC CCACCACTAA GTGTAAGTAT CTTTAAGCAT CAGCTAAAGA AATAA
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Protein sequence | MKETIQTDWI KSEAFNLENC CNDNPLNILG PHFFKGKWVT RVWMPEADEV NITFKDKTYK TTTPNHKWMF EAILHEDPKN NYQINVLRGG VSHSQQDPWA FKDEWMGEVD RHLFAEGNHH HIWKKMGAHI SEDINQKGVM FCIWAPNAKS ISIIGDINSW DGRHHPMQKR LGGVWELFMP ILKEGDVYKY EIRTQQGHIY EKADPYGFLH EVRPQNGSII SKLNNFNWED SSWITSRDSS SQINKPISVY EMHLGSWMHD STDNKYIEKN GNPRHPVPAA DLKPGTRFLT YPELTEKLIP YVKERGFTHI ELMPISEHPF DGSWGYQVTG WYAPTSRYGT PNEFKEFINK CHAEGIGVIL DWVPGHFPKD KHGLAFFDGC HLYEHGDPRI GEHKEWGTLI FNYSRNEVRN FLVANLIYWF EEFHIDGIRV DAVASMLYRD YLRPEGEWIP NENGGNENLE AVKFLQQANH VLFQHFPGAL SIAEESTTWP MVTEPTNVGG LGFNLKWNMG WMHDMLDYFE IDPWFRQFHQ NSVTFSITYN YTENFMLALS HDEVVHGKSH LLHKMPGDDW KKFANTRALL TYMWTHPGKK TIFMGMEFGQ RQEWNVWDDL QWELLEYEPH KGIRNLIDDL NKLYKNEPSL WKNDFDPYGF QWIDCDDTSN SVISFMRREN ESNEWLVVIA NFTPNFHESY KIGVPLEGYY KEIFNSDGSK YGGSNKGNMG GKDTLKYNIH NYENALEIAL PPLSVSIFKH QLKK
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