Gene P9515_06481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_06481 
SymbolhemE 
ID4719657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp578956 
End bp579996 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content35% 
IMG OID640080326 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_001010964 
Protein GI123965883 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.828005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAGA ATTTACCACT TTTACTATCT GCTGCTTTAG GCAAGAAAGT TAATAGGCCT 
CCAGTATGGA TGATGAGACA AGCAGGTAGG TATATGAAGA TTTATAGAGA TTTAAGAGAG
CGCTATCCAA GTTTTAGGGA AAGATCTGAG AACCCAGAAC TCTCTTATCA AATTTCAATG
CAACCTTTTA AGGCTTTCAA GCCGGATGGA GTGATTCTTT TTTCAGATAT TCTTACCCCT
CTGCCTGGAA TGGGTATCAA TTTTGAAATA ATAGAAAGTA AGGGGCCAAT CATAGAGAAT
CCCATAAAAA ATATTCATCA GATAGAAAAT TTGAAAGAAT TAGTTCCGAG CGAAAGTTTA
AGTTTTGTTG GAGAAGTCCT ATCCTCATTA AAAAAAGATG TAAATAATGA AGCTACTGTT
CTTGGATTCG TTGGAGCACC TTGGACTCTT GCTGCGTATG TAGTTGAAGG CAAAAGCAGT
AAAAATTATT CTTTAATAAA GTCAATGGCT TTCAAAGAGC CTGATTTGCT ACACAAGCTT
CTTGATCATT TTGCAAAATC CATAGGTGAG TATTTAAAAT ATCAAATCAA ATCTGGTGCT
CAGGTTGTAC AAATTTTTGA CTCTTGGGCA GGACAATTAA GTCCTCAAGA CTACGATATT
TTTGCTGGTC CTTATCAAAA AAAAGTGGTT GATATAGTTA AGGAAAAATA CCCAGAAACT
CCTATTATTT TATATATATC AGGAAGTGCT GGGCTATTAG AAAGAATGGC AAGAACTGGG
GTAGACATAA TTTCATTAGA CTGGACTGTA GATATCGAGG AAGCATGCAA GAGAATTCCT
GAAGGTATTG GTATTCAGGG TAATGTTGAT CCAGGTCTAT TATTCGGAAA TAAAGAATCC
ATAAAAGAGA GGATAGATAT TACTTTTAAC AAATCAAAAG GAAGAAAGTA TATTCTTAAT
TTAGGCCATG GAATTTTACC AGGTACACCT GAAGAAAATG CTCAAACATT TTTTGAACAC
GGGAAAAAAC TTACTTATTA A
 
Protein sequence
MGENLPLLLS AALGKKVNRP PVWMMRQAGR YMKIYRDLRE RYPSFRERSE NPELSYQISM 
QPFKAFKPDG VILFSDILTP LPGMGINFEI IESKGPIIEN PIKNIHQIEN LKELVPSESL
SFVGEVLSSL KKDVNNEATV LGFVGAPWTL AAYVVEGKSS KNYSLIKSMA FKEPDLLHKL
LDHFAKSIGE YLKYQIKSGA QVVQIFDSWA GQLSPQDYDI FAGPYQKKVV DIVKEKYPET
PIILYISGSA GLLERMARTG VDIISLDWTV DIEEACKRIP EGIGIQGNVD PGLLFGNKES
IKERIDITFN KSKGRKYILN LGHGILPGTP EENAQTFFEH GKKLTY