Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_06481 |
Symbol | hemE |
ID | 4719657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 578956 |
End bp | 579996 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640080326 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001010964 |
Protein GI | 123965883 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.828005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGAGA ATTTACCACT TTTACTATCT GCTGCTTTAG GCAAGAAAGT TAATAGGCCT CCAGTATGGA TGATGAGACA AGCAGGTAGG TATATGAAGA TTTATAGAGA TTTAAGAGAG CGCTATCCAA GTTTTAGGGA AAGATCTGAG AACCCAGAAC TCTCTTATCA AATTTCAATG CAACCTTTTA AGGCTTTCAA GCCGGATGGA GTGATTCTTT TTTCAGATAT TCTTACCCCT CTGCCTGGAA TGGGTATCAA TTTTGAAATA ATAGAAAGTA AGGGGCCAAT CATAGAGAAT CCCATAAAAA ATATTCATCA GATAGAAAAT TTGAAAGAAT TAGTTCCGAG CGAAAGTTTA AGTTTTGTTG GAGAAGTCCT ATCCTCATTA AAAAAAGATG TAAATAATGA AGCTACTGTT CTTGGATTCG TTGGAGCACC TTGGACTCTT GCTGCGTATG TAGTTGAAGG CAAAAGCAGT AAAAATTATT CTTTAATAAA GTCAATGGCT TTCAAAGAGC CTGATTTGCT ACACAAGCTT CTTGATCATT TTGCAAAATC CATAGGTGAG TATTTAAAAT ATCAAATCAA ATCTGGTGCT CAGGTTGTAC AAATTTTTGA CTCTTGGGCA GGACAATTAA GTCCTCAAGA CTACGATATT TTTGCTGGTC CTTATCAAAA AAAAGTGGTT GATATAGTTA AGGAAAAATA CCCAGAAACT CCTATTATTT TATATATATC AGGAAGTGCT GGGCTATTAG AAAGAATGGC AAGAACTGGG GTAGACATAA TTTCATTAGA CTGGACTGTA GATATCGAGG AAGCATGCAA GAGAATTCCT GAAGGTATTG GTATTCAGGG TAATGTTGAT CCAGGTCTAT TATTCGGAAA TAAAGAATCC ATAAAAGAGA GGATAGATAT TACTTTTAAC AAATCAAAAG GAAGAAAGTA TATTCTTAAT TTAGGCCATG GAATTTTACC AGGTACACCT GAAGAAAATG CTCAAACATT TTTTGAACAC GGGAAAAAAC TTACTTATTA A
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Protein sequence | MGENLPLLLS AALGKKVNRP PVWMMRQAGR YMKIYRDLRE RYPSFRERSE NPELSYQISM QPFKAFKPDG VILFSDILTP LPGMGINFEI IESKGPIIEN PIKNIHQIEN LKELVPSESL SFVGEVLSSL KKDVNNEATV LGFVGAPWTL AAYVVEGKSS KNYSLIKSMA FKEPDLLHKL LDHFAKSIGE YLKYQIKSGA QVVQIFDSWA GQLSPQDYDI FAGPYQKKVV DIVKEKYPET PIILYISGSA GLLERMARTG VDIISLDWTV DIEEACKRIP EGIGIQGNVD PGLLFGNKES IKERIDITFN KSKGRKYILN LGHGILPGTP EENAQTFFEH GKKLTY
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