Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_06271 |
Symbol | |
ID | 4719635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 560732 |
End bp | 561421 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 640080304 |
Product | cell wall biosynthesis glycosyltransferase |
Protein accession | YP_001010943 |
Protein GI | 123965862 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00807359 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCCTAAAA TCTCAATAAT TATTCCTACG TATAATGAAT CTCAACATTT ATCATTACTT CTTTCAGATT TATCAATATT CAATGAGGGA ATAGAAATTA TAATTGTTGA TTGTAATAGT GAAGATAAAA CTAGAGACAT AGCTAAATTT TATAGAACAA ACATATTTAA ATCAAAAGAA AAGAATAGAG GTTTGCAATT AAATCTAGGA GCCAAAAAAG CTAAAGGAGA ATGGTTTATT TTCATACATG CAGATTCTAG GCTTAGTAAA GGTTGGTTAA AAAAAGTGAA ATCAGTTATT AGAAACAAAG AAAACTTTAT TTATTTTTTT AAATTCAAGA TTAATAATGA AAAGCTCATT TATAGATTTC TTGAAATAGT TGTAAACCTT AGAAGTTTCT TTTTAAAAGA TCCCTATGGA GATCAAGGAC TTATAATTCA CAGGCGGACA TATTTCAAAA ATAATGGTTA TAGAAAAATT CCTTTGATGG AAGATCTAGA TTTCATAAAA AGATTAAAGA ATAACGAACA TCTAAAAATG TTAACAATTC CAATTTATAC AAGTAGCAGG AAGTGGGAAA AAACTAATAT TATTTCTCAA GCATTCAAAA ATTGGAATTT CAGAAAAAGG TGGTTAAGAG GGGAATCTAT AAAATCTTTA TATAATGACT ACTATAAAAA ATTAAATTAA
|
Protein sequence | MPKISIIIPT YNESQHLSLL LSDLSIFNEG IEIIIVDCNS EDKTRDIAKF YRTNIFKSKE KNRGLQLNLG AKKAKGEWFI FIHADSRLSK GWLKKVKSVI RNKENFIYFF KFKINNEKLI YRFLEIVVNL RSFFLKDPYG DQGLIIHRRT YFKNNGYRKI PLMEDLDFIK RLKNNEHLKM LTIPIYTSSR KWEKTNIISQ AFKNWNFRKR WLRGESIKSL YNDYYKKLN
|
| |