| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_06081 |
|---|
| Symbol | chlB |
|---|
| ID | 4719742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 544069 |
|---|
| End bp | 545649 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640080285 |
|---|
| Product | light-independent protochlorophyllide reductase subunit B |
|---|
| Protein accession | YP_001010924 |
|---|
| Protein GI | 123965843 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAA CTCTTTGGAC ATATGAAGGA CCTCCTCACG TAGGTGCCAT GAGAGTGGCA
TCATCAATGA AAGAAATTCA TTATGTTCTC CATGCTCCTC AAGGTGATAC TTATGCAGAT
CTTCTTTTCA CTATGATTGA GAGAAGAGGT AAAAGACCAC CTGTAACTTA TACAACATTT
CAAGCCAGAG ATTTAGGAGG AGATACAGCG GAATTAGTTA AAAGAAATAT TTCTGAGGCA
GTAGAAAGAT TTAAACCAAA AACTCTTTTA ATAGGTGAAA GCTGTACTGC TGAATTAATA
CAAGATCAAC CAGGAGCTCT TGCTAAGGGT ATGGGTTTTA ATATTCCAAT AGTTAACCTT
GAACTGCCCG CTTATAGCAA AAAAGAAAAC TGGGGAGCTT CAGAAACCTT TTATCAAATA
ATTAGAACTC TTTTGAACGA TAAGACGAAT GAAATTAATA ATATTAATCC TCAAAGATGG
AAGTCTTTAG GTCGAAGACC TAAAGTAAAT ATATTAGGTC CTACATTATT AGGATTTAGA
TGCAGAGATG ATGTTATTGA GATTCAACGT ATACTTTCAG AGCAAGGTAT TGATACTAAT
GTTGTTGCAC CACTGGGTTC AAGTCCAGAT GACATTAAAA GACTAATAGA TGCTGATATT
AATATTTGTC TATATCAAGA AATTGCAGAG ACTTCTTGTG AATGGCTTAA GCGTAAATGT
GGAATGGAAT TTACCACAAC TATTCCAATT GGTATAAAAA ATACAATTAA TTTTATTAAT
GAAGTACATG ATAAACTTGG CCTTCCCTTA ACAAATAAAG AGGAACTAGA GCACAAGTCA
AAATTACCAT GGTATTCAAA ATCAATTGAT TCAAACTACT TGACAGGAAA AAGGGTTTTT
ATCTTTGGTG ACGGGACTCA TGCTATTGCA GCAGCCAAAA TTGCCAAGGA TGAACTAGGA
TTTGAAGTTG TGGGTTTGGG GACTTACAGC AGAGAAATGG CAAGGCAAGT TAGAGCTGCA
GCTAAGGATT TAAATATAGA AGCACTCATT ACTAACAGCT ACCTAGAGGT GGAAGACGCG
ATGAAAAAAG CATCCCCTGA ATTAGTTTTA GGGACTCAAA TGGAAAGGCA CAGCGCAAAA
AGACTTGGTA TACCATGCTC AGTAATAAGT ACTCCAATGC ATGTTCAAGA TGTTCCTGCT
AGATATAGCC CCCAAATGGG ATGGGAAGGA GCAAATGTAA TTTTTGACGA CTGGGTTCAT
CCTTTAATGA TGGGTCTTGA AGAACATCTT ATCGATATGT TTAAACATGA TTTTGAATTC
GTTGATGGCC ATCAAAGTCA TCTTGGTCAT ACTGCTACAA AAGGGCTCGA TAATATTGAA
GATGAACATG GTCTAAAGAA TGACACCCTC AAAAAGAATG GAGGTGTTCT TTGGACAGAA
TCAGGGAGAG CAGAACTTAC AAAAGTTCCA TTTTTTGTAA GAGGTAAAGT TAAATCTAAT
ACCGAGAAAT ACGCTCTTTC AAAAGGTCTT CCTGAAATTA GCGACGAGAC CCTTTACGAT
GCAAAAGCAT ATTTCAGCTA G
|
|---|
| Protein sequence | MELTLWTYEG PPHVGAMRVA SSMKEIHYVL HAPQGDTYAD LLFTMIERRG KRPPVTYTTF
QARDLGGDTA ELVKRNISEA VERFKPKTLL IGESCTAELI QDQPGALAKG MGFNIPIVNL
ELPAYSKKEN WGASETFYQI IRTLLNDKTN EINNINPQRW KSLGRRPKVN ILGPTLLGFR
CRDDVIEIQR ILSEQGIDTN VVAPLGSSPD DIKRLIDADI NICLYQEIAE TSCEWLKRKC
GMEFTTTIPI GIKNTINFIN EVHDKLGLPL TNKEELEHKS KLPWYSKSID SNYLTGKRVF
IFGDGTHAIA AAKIAKDELG FEVVGLGTYS REMARQVRAA AKDLNIEALI TNSYLEVEDA
MKKASPELVL GTQMERHSAK RLGIPCSVIS TPMHVQDVPA RYSPQMGWEG ANVIFDDWVH
PLMMGLEEHL IDMFKHDFEF VDGHQSHLGH TATKGLDNIE DEHGLKNDTL KKNGGVLWTE
SGRAELTKVP FFVRGKVKSN TEKYALSKGL PEISDETLYD AKAYFS
|
|---|
| |