Gene P9515_05041 details

Gene Information

• Locus tag: P9515_05041
• Symbol: ribE
• ID: 4720017
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 452294
• End bp: 452953
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640080179
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_001010820
• Protein GI: 123965739
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0423095
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACAG GAATAATTCA GTCAGTAGGA AAACTTAAAA AAGAAAAAGA TTTCTTAATT 
ATTGAAATTC TTGATGAACC TTTTGATATG CAAATAGGCG ATAGTATCGC AGTTAATGGG 
ATTTGTTTAA CGGTAAAAGA AATTTCAAAT AATCAATTTA AAGTAGATGT AAGTGAAGAA 
ACTTTTAAAA AAACTACTTT AGGAGATAAA TCAAGTATCA ATCAAATAGT TAATTTGGAA 
CCAGCTATCC GTCTTTCAGA TCGTCTTGGG GGGCACATAG TAAGTGGACA TATAGATGGT 
TTGGGAAAAG TTGAAAATAT AGAAAAACTA GAAAAATCAT GGATGTTAAA AATTAAGTGG 
CAAAATAAAA AATTTTCCAA ATACATAGTT GATAAAGGAA GTATATGCGT AAACGGAATT 
AGTCTGACAA TTGCAAAATC TGAGAATCAA GGAGAAATTT TTACGATCGC AATTATCCCT 
CATACCTGGG ATAACACGAA TCTGAAAAAT TTATCAATTG GCGATAGTGT AAATCTTGAA 
GGAGATGCAT TAATTAAATA CGTCGAAAAA TTACTTCTAT TTAACAAAAA TAGAGAATCA 
GATAACTTTT CTGAAGAAAT CTCTTCAAAT TGGCTTAAAG AAAATGGCTG GGATAAATAA 

 

Protein sequence

MFTGIIQSVG KLKKEKDFLI IEILDEPFDM QIGDSIAVNG ICLTVKEISN NQFKVDVSEE 
TFKKTTLGDK SSINQIVNLE PAIRLSDRLG GHIVSGHIDG LGKVENIEKL EKSWMLKIKW 
QNKKFSKYIV DKGSICVNGI SLTIAKSENQ GEIFTIAIIP HTWDNTNLKN LSIGDSVNLE 
GDALIKYVEK LLLFNKNRES DNFSEEISSN WLKENGWDK