Gene P9515_05001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_05001 
Symbol 
ID4720013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand+ 
Start bp448230 
End bp448880 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content31% 
IMG OID640080175 
Producthypothetical protein 
Protein accessionYP_001010816 
Protein GI123965735 
COG category[S] Function unknown 
COG ID[COG4241] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.543235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAATC ATATGAAATT TTTAAGAAAA AATGACGCAC TTAATATTGT TGAACCTTCC 
TATTTAGCTT CTCTTTCTTC TTTACTTTGG GTCGCTTTAT ATTATTTACC TATAGGTGGA 
GCATTGTTGA GATTAGTATT ACCACTCCCT ATGATCTTGT TGCACTTGAG AAGAGGAACT 
AGTACTGCCT TGGAAGGCCT CATAATACAA TTTCTTTTGT TATTAATACT TATGGGTCCA 
ATTAGAGGGA CTTTATTTTT ATTCCCATAT GGAATATTAG CCTTTTGGCT CGGATGGTCT 
TGGTTCAAGC AAAAAAACTG GTGGCTTAGT TGGAGTGTAG GTTTTATTCT AGGGACATTA 
GGTTTTTTTA TAAGAGTATT TGCATTATCA ACGTTAGTTG GTGATAATCT TTGGATAATA 
ATAACAAGAG CAAGTTATGG ACTTTTAGAC AAATTTATAG AATTATTTAA TTTACCCTTT 
TCACCTTCGA TCAGAATTAT ACAATTAGTC GCACTACTAT TAATAATTTT TCAAGAAATG 
GTTTATGTCT TAACTATACA TATTCTTTCA TATTCTCTTT TCCCTAGATT AAATTCAAAT 
ATTCCTGATC CTCCAAAAAT AATGAATGGA TTTGTTGATT TAGGTCTTTG A
 
Protein sequence
MKNHMKFLRK NDALNIVEPS YLASLSSLLW VALYYLPIGG ALLRLVLPLP MILLHLRRGT 
STALEGLIIQ FLLLLILMGP IRGTLFLFPY GILAFWLGWS WFKQKNWWLS WSVGFILGTL 
GFFIRVFALS TLVGDNLWII ITRASYGLLD KFIELFNLPF SPSIRIIQLV ALLLIIFQEM 
VYVLTIHILS YSLFPRLNSN IPDPPKIMNG FVDLGL