| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_04711 |
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| Symbol | rpsD |
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| ID | 4719222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 420573 |
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| End bp | 421181 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640080146 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001010787 |
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| Protein GI | 123965706 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.22255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAGAT ACCGCGGCCC AAGATTAAGG GTTACGCGTC GCTTGGGAGA ACTACCAGGT
CTCACTAGGA AAGCTTCAAA GAAGTCAAAT CCTCCAGGTC AGCACGGCCA AGCCCGTCGC
AAGCGATCAG AATACGCAAT TCGTCTAGAA GAAAAGCAGA AACTTAGATT CAACTATGGA
GTTTCTGAAA GACAACTTGT TCGTTACGTT AAAAAAGCTA GAGCTCAAGA AGGCTCTACA
GGAACCAACC TCCTTAGACT TTTAGAAAAC AGATTAGATA ATGTTTGTTT TAGATTAGGT
TTTGGTGGGA CAATCCCTGG CTCAAGACAA TTAGTAAATC ATGGGCATGT TACTGTTAAC
GGCAAAGTTC TTGATATTGC TGGTTACCAA TGTAAATCAG GAGATGTAAT TAGCATTAAG
GAAAAAAAAG CAAGTAAAAA ACTTGTTGAA GGAAATATTG AATTCCCCGG TTTAGCAAAT
GTCCCTCCGC ATATAGAATT AGATAAACCT AAATTAACAG GTAAAATAAA CGGCAAGTGT
GATAGAGAAT GGGTTGCTCT TGAAATAAAC GAGCTACTAG TTGTTGAATA TTATTCAAGA
AAAGTTTAA
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| Protein sequence | MSRYRGPRLR VTRRLGELPG LTRKASKKSN PPGQHGQARR KRSEYAIRLE EKQKLRFNYG
VSERQLVRYV KKARAQEGST GTNLLRLLEN RLDNVCFRLG FGGTIPGSRQ LVNHGHVTVN
GKVLDIAGYQ CKSGDVISIK EKKASKKLVE GNIEFPGLAN VPPHIELDKP KLTGKINGKC
DREWVALEIN ELLVVEYYSR KV
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