| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_04661 |
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| Symbol | pdhC |
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| ID | 4719290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 414289 |
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| End bp | 415656 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640080141 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_001010782 |
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| Protein GI | 123965701 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCACG AAATATTTAT GCCAGCTCTT AGTTCTACTA TGACTGAAGG CAAAATTGTT
GAATGGTTGA AAAATCCTGG AGATAAAGTT GAAAGAGGAG AATCTGTTTT AGTCGTTGAA
TCAGATAAAG CTGATATGGA TGTGGAATCT TTTCAAGACG GATATCTTGC GGCAGTTCTC
ATGCCAGCTG GGAGCACTGC TCCAGTAGGG GAAACCATAG GACTTATTGT AGAAAATGAG
GATGAGATAG CTTCTATACA AGAACAAAAT AAAGGTAAAC AGATTGAAGT ATCCAGTGAT
GCCCAACTCA AATTGCCAAA TAAAAAATCT GAAATAATAG AAGAGAAGCA AAAAGAGCTG
CCTCAAATTA ATGAGCAGCA AGTCGAGATT AAAAGGGAAA AAGTGATAAA TACTTCTAAT
GAAATTCAAT TTAATGCTTC TACTAGTAAT AATTCCTCGA GAGTAATAGC ATCTCCAAGG
GCAAAAAAAC TTGCTTCAAC AATGGGAGTT GAATTGACAA AAGTGCATGG ATCAGGACCT
CATGGAAGGA TTCAGGCTGA GGATGTATTG AAGGCAAATG GGCAACCTGT TTCTATCCCA
TGGATTGGAG AGGGGAGTTC TCCAGCTAGT ATTGGCAGTT CCCATGTTCA AGCTGAAAGT
AAGTCAGAGA CATTAGGGAA TAGTTTTGGT AAACCTGGAG AAACTGTTAA ATTTAATACT
CTTCAAAAAG CTGTTAATAA CAATATGGAA TCTAGTTTAA ATGTTCCATG TTTTAGAGTT
GGTTATTCAA TTAATACTGA TAAATTGGAT AATTTTTATA AGAAAGTAAA GCAAAATGGT
GTTACTATGA CTGCATTATT AGTCAAGGCC GTTGCAAAGA CACTTAAAAA ACATCCCCAA
GTTAATTCAA GCTTTTCAGA AAACGGAATT TCTTATCCAG AAAATATAAA TATTGCTGTA
GCTGTTGCTA TGGAAGATGG CGGATTGATA ACTCCAGTAT TAAAAGAACC TTGTAACACT
GATTTATTTG AATTATCTAG AGAGTGGAAA GACCTTGTGA AAAGATCTAG AGCAAAACAA
TTAGAACCTG ATGAATACTC AACAGGAACA TTTACGTTGT CTAATTTAGG AATGTTTGGT
GTTGATAGAT TTGATGCAAT ACTTCCACCA GGTACGGGTG CTATTTTAGC CATAGCATCA
TCTAAGCCAA CAGTCGTTGC TAACAATGAT GGTTCAATAT CTGTTAAAAA AATAATGCAA
GTAAATTTAA CCGCTGATCA TAGAGTGATT TATGGTGCTG ATGGTGCTTC ATTCTTGAAA
GACTTGTCTT CTCTCATTGA AAATGAGCCA GAGACACTTG TTTCCTGA
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| Protein sequence | MSHEIFMPAL SSTMTEGKIV EWLKNPGDKV ERGESVLVVE SDKADMDVES FQDGYLAAVL
MPAGSTAPVG ETIGLIVENE DEIASIQEQN KGKQIEVSSD AQLKLPNKKS EIIEEKQKEL
PQINEQQVEI KREKVINTSN EIQFNASTSN NSSRVIASPR AKKLASTMGV ELTKVHGSGP
HGRIQAEDVL KANGQPVSIP WIGEGSSPAS IGSSHVQAES KSETLGNSFG KPGETVKFNT
LQKAVNNNME SSLNVPCFRV GYSINTDKLD NFYKKVKQNG VTMTALLVKA VAKTLKKHPQ
VNSSFSENGI SYPENINIAV AVAMEDGGLI TPVLKEPCNT DLFELSREWK DLVKRSRAKQ
LEPDEYSTGT FTLSNLGMFG VDRFDAILPP GTGAILAIAS SKPTVVANND GSISVKKIMQ
VNLTADHRVI YGADGASFLK DLSSLIENEP ETLVS
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