Gene P9515_04641 details

Gene Information

• Locus tag: P9515_04641
• Symbol: fadD
• ID: 4719288
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 411726
• End bp: 413651
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640080139
• Product: putative long-chain-fatty-acid--CoA ligase
• Protein accession: YP_001010780
• Protein GI: 123965699
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1022] Long-chain acyl-CoA synthetases (AMP-forming)

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0522335
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAAC TAGCATATTG GCCCGCATCA AAATCTCATC CAAAAAATGA GAAATTTATT 
AGAGAAAGAA AGTACATAAA CAATCTTGTT CACGTTGATC AAATATGGGA ATACTTAAAG 
TTTAAATGTG GTGATACTTT AGCTATTAAT GATTTAAGAG GAAAAAATAA AGAAAAATAT 
TCTTATTCTG AGTTGGCTAA TTTAATAACT AAAGTTTCTC TATCTTTTAA AACATATGGA 
TTAGTTAAGG GTGATGTTGT CACAGTAATA TCTGAAAACT CACCGAGATG GTTAATAGCT 
GATCAAGGGT TGATGCGTTT AGGAGCAATT AATGCTGTAA GAGGAATTAA TTCACCTTCA 
GTAGAATTAG AGTATATTAT TGACCATTCC AAATCTGTTG GTCTCATAGT CCAATCTAAG 
GAAGTGTGGT TGAAATTAAA TGAAAAAGAG AAACTAAAAA AAAGATTTAA ATTTATTATT 
AATCTGGAAG ATGAACAATT TGAAGATTTA ATAAATTGGC AAGAATTTAT CAAAGTAGGA 
GATAAAGGAT ATTTTGAAAA TAATAGTTTT GAAAAAGATA ATAATCAGAT TAATGATATT 
GCAAGTATTC TTTATACCTC AGGGACAACA GGGAAACCAA AAGGAGTTCC CTTAACACAT 
GCAAACTTTT TACATCAAAT CATAAATTTA GCCTATATCG CCGATCCGGA AACGGGAACT 
TCCGTATTGA GTGTATTACC TATTTGGCAT TCATACGAAA GAAGTGCAGA ATATTTCTTT 
TTTTCATGTG GTTGTACACA ATTTTATACA AATCCAAAAT TTTTGAAAGA TGATATAAAA 
AAAGTCAAGC CAGTTGTTAT GGCTACTGTC CCAAGGCTAT GGGAGGCTAT TCATGATGGT 
TTTTTCTTGG CTTTAAAAAA AATGAATCCT AAAAAACAGA AAACTATAAA GTTTTTGATA 
AAGAATAGTT CCATTTTTAA AAGAAATCTT AGAAAGATCA GAAATATAGA AATTAATCAA 
GTAAGTTCTC TAGCAAAAAT ATGTTTGATA ATATCTGTCT TGGGTAGATT TTTTCTACAT 
AAGATATCTT CTACTTTTTT GTGGCCAAGC ATTCTGAAAC AATTATGTGG AGAAAAACTT 
AAATTCCCAA TTAATGGTGG TGGTGCTTTA CCTGAACATG TTGATTTATT TTTTGAATCT 
TTGGGTATAG ATGTTCTTGT GGGTTATGGG CTTACAGAAA CATCTCCAGT ACTGACTTGT 
AGAAGAAGAG AATTAAATGT AAGAGGATCT TCTGGACAGC CTTTAGCATT TACTGAAATT 
AAAATTGTGA ATGAAGAGAA AGATAAGATT TTGGAGTTTA GAGAGGTCGG TAAGATTCTT 
GTTAAGGGAC CACAAGTGAT GAAAGGATAT TTGAATAATG ATTCCGCTAC TAAAGATGTT 
TTATCAAAAG ATGGTTGGTT TGATACTGGA GATTTAGGTT TTCTTATACC AAATGGATCT 
TTGGTCATAA CAGGAAGAGC TAAGGATACT ATAGTTCTCT CTAGTGGAGA AAATATTGAG 
CCTAATCCTT TAGAAACTCA AATTTTAAGT TCTGAATTTA TTAATCAAGT TCAATTAGTA 
GGCCAAGATA AAAAATTTTT AACAGCGCTT GTAGTTCCTA ACATTGAATT AGTAAAAAAT 
AAATTCTTTG CGAATGATCT TTCTACATTA AACTCGAATA AAAATATTGG TTTATTTTTT 
AAATCTGAGA TAAATAGTTT GTTAAAAAAA AGATTAGGAG CAAGATTTGA GGAACAGATA 
TTAGATTGTT ATTTTGTTGA TGCTTTTACT TTAGAAAATG GTTTATTAAC TCAAACTCTT 
AAGCAGAAAA GAAGAGAAAT AGTAGATATG TATTCATCAA AGATAGAAGA TATGTATAAA 
AAATAA 

 

Protein sequence

MNELAYWPAS KSHPKNEKFI RERKYINNLV HVDQIWEYLK FKCGDTLAIN DLRGKNKEKY 
SYSELANLIT KVSLSFKTYG LVKGDVVTVI SENSPRWLIA DQGLMRLGAI NAVRGINSPS 
VELEYIIDHS KSVGLIVQSK EVWLKLNEKE KLKKRFKFII NLEDEQFEDL INWQEFIKVG 
DKGYFENNSF EKDNNQINDI ASILYTSGTT GKPKGVPLTH ANFLHQIINL AYIADPETGT 
SVLSVLPIWH SYERSAEYFF FSCGCTQFYT NPKFLKDDIK KVKPVVMATV PRLWEAIHDG 
FFLALKKMNP KKQKTIKFLI KNSSIFKRNL RKIRNIEINQ VSSLAKICLI ISVLGRFFLH 
KISSTFLWPS ILKQLCGEKL KFPINGGGAL PEHVDLFFES LGIDVLVGYG LTETSPVLTC 
RRRELNVRGS SGQPLAFTEI KIVNEEKDKI LEFREVGKIL VKGPQVMKGY LNNDSATKDV 
LSKDGWFDTG DLGFLIPNGS LVITGRAKDT IVLSSGENIE PNPLETQILS SEFINQVQLV 
GQDKKFLTAL VVPNIELVKN KFFANDLSTL NSNKNIGLFF KSEINSLLKK RLGARFEEQI 
LDCYFVDAFT LENGLLTQTL KQKRREIVDM YSSKIEDMYK K