Gene P9515_03581 details

Gene Information

• Locus tag: P9515_03581
• Symbol: petD
• ID: 4719669
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 329862
• End bp: 330344
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640080026
• Product: cytochrome b6-f complex subunit IV
• Protein accession: YP_001010674
• Protein GI: 123965593
• COG category: [C] Energy production and conversion
• COG ID: [COG1290] Cytochrome b subunit of the bc complex
• TIGRFAM ID: [TIGR01156] cytochrome b6/f complex subunit IV

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.170211
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTACTC TAAAAAAACC CGATTTATCA GATCCGAAAT TAAGAGCTAA ATTAGCTAAA 
GGTATGGGTC ACAATTATTA CGGTGAACCA GCTTGGCCAA ACGATCTTTT ATACATTTTC 
CCTGTTGTAA TACTGGGAAC AATAGCTTGT GTTGTGGGGC TGGCTGTTCT AGATCCGGCC 
ATGTTGGGAG ATAAGGCTAA TCCATTTGCC ACTCCTTTAG AAATACTTCC TGAATGGTAT 
CTTTATCCTG TGTTTCAAAT ACTTAGGGTA GTTCCAAATA AGTTACTTGG AATAGCTCTT 
CAAACATTAA TTCCTCTTGG ATTAATGATC TTGCCTTTTA TAGAAAATGT AAACAAATTC 
TCTAATCCTT TTAGAAGACC AGTAGCGATG GTGGTTTTTC TTTTTGGAAC TTTTTTAACT 
ATTTACCTTG GAATAGGTGC TTGCTTACCA ATTGATAAGT CTCTAACTTT AGGATTATTT 
TAA 

 

Protein sequence

MSTLKKPDLS DPKLRAKLAK GMGHNYYGEP AWPNDLLYIF PVVILGTIAC VVGLAVLDPA 
MLGDKANPFA TPLEILPEWY LYPVFQILRV VPNKLLGIAL QTLIPLGLMI LPFIENVNKF 
SNPFRRPVAM VVFLFGTFLT IYLGIGACLP IDKSLTLGLF