Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_03571 |
Symbol | petB |
ID | 4719668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 329162 |
End bp | 329818 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640080025 |
Product | cytochrome b6 |
Protein accession | YP_001010673 |
Protein GI | 123965592 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.223543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAATT CCTCATCTGT TTACGACTGG TTTCAAGAGA GACTTGAAAT TCAAGACATA ACCGACGACG TAACTTCCAA GTACGTACCC CCTCACGTAA ATATTTTTTA CTGTTTAGGA GGCATAACTT TAGTATGCTT CCTAATTCAA TTTGCAACAG GTTTTGCAAT GACTTTTTAC TATAAGCCAA CTGTTACCCA AGCTTATAAC TCTGTAAGCT ACTTAATGAC TGATGTAAGT TTTGGTTGGT TAATAAGATC TGTTCATAGA TGGAGTGCAT CTATGATGGT TTTGATGTTA ATTTTACATG TTTTTAGGGT TTACCTTACC GGTGGATTTA AAAGACCAAG AGAATTAACT TGGGTAACAG GTGTTGTCAT GGCAGTTATA ACAGTTGCTT TTGGAGTCAC AGGTTATTCA CTTCCATGGG ATCAAGTTGG ATACTGGGCG GTTAAGATTG TTTCAGGTGT GCCTGCAGCG ATTCCAATTA TTGGTGATTT CATGGTTGAA CTTCTTCGTG GAGGAGAAAG TGTAGGGCAA TCAACTCTTA CAAGATTTTA TAGTCTCCAT ACTTTCGTTC TTCCTTGGTC CTTAGCAGTA TTTATGCTTA TGCATTTTCT TATGATTCGT AAACAAGGTA TTTCAGGTCC GCTATAA
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Protein sequence | MSNSSSVYDW FQERLEIQDI TDDVTSKYVP PHVNIFYCLG GITLVCFLIQ FATGFAMTFY YKPTVTQAYN SVSYLMTDVS FGWLIRSVHR WSASMMVLML ILHVFRVYLT GGFKRPRELT WVTGVVMAVI TVAFGVTGYS LPWDQVGYWA VKIVSGVPAA IPIIGDFMVE LLRGGESVGQ STLTRFYSLH TFVLPWSLAV FMLMHFLMIR KQGISGPL
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