Gene P9515_03451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_03451 
Symbolrps1a 
ID4718704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand- 
Start bp318527 
End bp319618 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content34% 
IMG OID640080012 
Product30S ribosomal protein S1 
Protein accessionYP_001010661 
Protein GI123965580 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA ATTCTTCCGA AACCATAAAA GAAATTTCAG ACGATAAAGA AATTGAAAAT 
TCAACTGTAA AAGAAAATAC TTCAGAAACT CCAAAAATTG AAGACTTATC ATTTGAGTCC 
AAGGATATTC CCTCTGCAGA TTCTTCATCA AGTAGAAGAA ATAGTGATCT TGATAGTGCA 
GGATTTACTC AAGAAGATTT TGCATCATTA CTAGGAAAGT ATGATTACAA TTTCAAACCT 
GGGGATCTTG TTAATGGTAC GGTTTTTGCA TTAGAGCCTA AAGGAGCGAT GATAGATATC 
GGTGCTAAGA CTGCTGCTTT TATGCCTATG CAAGAAGTAT CAATAAATAG AGTTGAAGGA 
CTTAGTGATG TTTTGCAGCC TTCAGAAAGT AGAGAATTTT TTATAATGAG TGAAGAGAAT 
GAAGATGGTC AATTAGCATT ATCAATTAGA AGGATAGAAT ATCAAAGAGC TTGGGAAAGA 
GTAAGACAAT TACAAAAAGA GGATGCCACC ATATATTCTG AGGTTTTCGC AACTAATAGA 
GGGGGTGCTT TAGTTAGAGT TGAGGGATTA AGAGGTTTTA TCCCTGGATC TCATATCAGT 
GCAAGGAAAA TAAAAGAAGA TTTAGAGGGA GAATATTTAC CTTTGAAATT TCTGGAAGTA 
GACGAAGAAA GAAACAGATT AGTTCTAAGT CACCGAAGGG CTTTAGTTGA GAAAAAAATG 
AATAGGCTTG AAGTCGGTGA AGTAGTTGTA GGTTCTGTAA AAGGAATAAA ACCTTATGGT 
GCTTTTATTG ATATCGGAGG TGTAAGTGGT CTTCTACATA TATCTGAAAT TAGTCATGAA 
CATATTGAAA CTCCTCATAA TGTATTGAAT GTAACAGATC AAATGAAAGT GATGATAATA 
GATTTAGATT CAGAAAGAGG GAGAATATCC TTATCAACAA AAGCTTTAGA ACCTGAACCA 
GGAGATATGT TAACCGACCC ACAAAAAGTT TTTGACAAAG CTGAAGAAAT GGCTGCAAAA 
TATAAGCAAA TGTTACTTGA GCAAACTGAT GAGAATGATG AGCAAACAGC AGATATTCCT 
GAAAGTGAAT AA
 
Protein sequence
MIENSSETIK EISDDKEIEN STVKENTSET PKIEDLSFES KDIPSADSSS SRRNSDLDSA 
GFTQEDFASL LGKYDYNFKP GDLVNGTVFA LEPKGAMIDI GAKTAAFMPM QEVSINRVEG 
LSDVLQPSES REFFIMSEEN EDGQLALSIR RIEYQRAWER VRQLQKEDAT IYSEVFATNR 
GGALVRVEGL RGFIPGSHIS ARKIKEDLEG EYLPLKFLEV DEERNRLVLS HRRALVEKKM 
NRLEVGEVVV GSVKGIKPYG AFIDIGGVSG LLHISEISHE HIETPHNVLN VTDQMKVMII 
DLDSERGRIS LSTKALEPEP GDMLTDPQKV FDKAEEMAAK YKQMLLEQTD ENDEQTADIP 
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