Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_02761 |
Symbol | thyX |
ID | 4720147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 256089 |
End bp | 256727 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640079940 |
Product | FAD-dependent thymidylate synthase |
Protein accession | YP_001010592 |
Protein GI | 123965511 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1351] Predicted alternative thymidylate synthase |
TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.990292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAG TTGAGCTTAT TACACTAACT CCAGATGCGG AAAAAACAAT GGCTTTTATA GCCAGAGTTT CTAATCCTTC TAATCAAGAT AATGATAAAT TTGCAGGATT ATTAAGATAT TGTATTCAAC ATGAGCACTG GTCTGTTTTT GAGCAATCAT GTATGACATT AAAAATTGAG ACTAATAGAG GTATAGCTGC TCAAATTCTT AGACATAGAT CATTTACTTT TCAAGAATTC TCCCAAAGAT ATGCAGAAAC TAATTTACTA GGAAATGACA TTCCTATCCC AGAATTAAGG AGACAAGATA AAAAGAATCG TCAAAATAGT ATGGATGATA TACCTAATGA AGTTAAAAGC AAATTTTCAG AAAAAATTGA AAAACATTTT CAAGAGGCAA ATAATTTATA TGAAGAAATG CTTAATGCAG GGATAGCAAA GGAATGTGCA AGATTTATTA TGCCATTGGC TACTCCAACC AGAATTTATA TGACAGGTTC CTGTAGGTCT TGGATTCACT ATATACAATT AAGATCAAAA GAAGGAACGC AAAAAGAACA TATGGAAATA GCTGAAGATT GTAAGACAGT ATTTATCAAA TCTTTTCCAT CTGTATCTGA AGCACTGAAT TGGGAATAA
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Protein sequence | MSRVELITLT PDAEKTMAFI ARVSNPSNQD NDKFAGLLRY CIQHEHWSVF EQSCMTLKIE TNRGIAAQIL RHRSFTFQEF SQRYAETNLL GNDIPIPELR RQDKKNRQNS MDDIPNEVKS KFSEKIEKHF QEANNLYEEM LNAGIAKECA RFIMPLATPT RIYMTGSCRS WIHYIQLRSK EGTQKEHMEI AEDCKTVFIK SFPSVSEALN WE
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