| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_02321 |
|---|
| Symbol | rplA |
|---|
| ID | 4720368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 213565 |
|---|
| End bp | 214272 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640079895 |
|---|
| Product | 50S ribosomal protein L1 |
|---|
| Protein accession | YP_001010548 |
|---|
| Protein GI | 123965467 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TATCCAAAAG AATGACTGCT CTATCAACAA AGATAGAGGA TCGCACATAT
GCTCCCCTTG AAGCTTTAGC CATTATCAAG GAAAATGCAA ACGCTAAATT TGATGAGACT
ATTGAAGCTC ATATTCGTTT AGGCATTGAT CCAAAATATA CAGATCAACA GCTAAGAACA
ACCGTAGCTC TTCCTCATGG CACTGGCCAA AGTATTAAAA TTGCTGTTAT AACCAGCGGT
GAAAATGTAG CAAAAGCCAA ATCTGCAGGT GCAGATCTTT TTGGAGAAGA GGATTTGGTT
GAAAGCATTA ATAAAGGTAA TATGGATTTT GATTTGCTGA TTGCAACACC TGATATGATG
CCAAAAGTTG CAAAACTTGG AAGGGTTTTG GGCCCAAGGG GATTAATGCC AAATCCCAAA
GCCGGTACTG TAACTAGCGA TATAGCAAGT GCAATAAAAG AATTTAAAGC GGGTAAACTA
GAATTTAGAG CAGATAAAGC TGGAATCGTA CATGTTCGTT TTGGAAAAGC TAGTTTTACC
GAAAATGCCT TATTTGAAAA CTTAAAGACG TTACAAGAAT CTATCGATAA AAATAAGCCT
AGTGGTGCGA AGGGTAAGTA TTGGAAAACT TTTTATGTAA CTTCAACTAT GGGACCTTCT
GTTCAAGTCG ACATAAATGC ATTACAAGAT TACCAGCCTG AAAGTTAA
|
|---|
| Protein sequence | MKKLSKRMTA LSTKIEDRTY APLEALAIIK ENANAKFDET IEAHIRLGID PKYTDQQLRT
TVALPHGTGQ SIKIAVITSG ENVAKAKSAG ADLFGEEDLV ESINKGNMDF DLLIATPDMM
PKVAKLGRVL GPRGLMPNPK AGTVTSDIAS AIKEFKAGKL EFRADKAGIV HVRFGKASFT
ENALFENLKT LQESIDKNKP SGAKGKYWKT FYVTSTMGPS VQVDINALQD YQPES
|
|---|
| |