Gene P9515_02091 details

Gene Information

• Locus tag: P9515_02091
• Symbol: prfB
• ID: 4720345
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 190875
• End bp: 191939
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640079872
• Product: peptide chain release factor 2
• Protein accession: YP_001010525
• Protein GI: 123965444
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR00020] peptide chain release factor 2

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAGGA TTGTCTTTGA CGTCCCCAGT TTAGTAGCCA AGAGAAAAGA GTTAGAGCAA 
ATTGCGGCAG AACCAGATTT CTGGATTAAT CAGGCGGCAG CAAAGAAACA TATGCTTAAT 
CTTGATGATG TTAGAGATCA ACTTCAATTA TTAGATAAAT GGAAAATTTT GATTGCTGAT 
GCTGAAGCTT CTCTTGAGCT TTATTCCTTA GATCCTGAAG AAGAAATGAT TGTTGAATCG 
CATTTAGGTT TGGTAACTTT AAGAGAGAAT TTAGACAAGT GGGAATTCCA AAGATTGTTA 
TCTGGTGAAT ATGATAAAGA GTCTGCTATT GTCTCTATTA ATGCTGGAGC AGGTGGTACT 
GATGCACAAG ATTGGGTAGA AATATTATTA AGAATGTATT CAAGGTGGGC GGATAATAAT 
GGTATGAGTT TAGAAATTAC TGACTTATCT AATGGAGAAG AAGCAGGTAT TAAAAGCGTT 
ACTTTTGAAG TTAATGGTAA ATATGCTTAT GGTTATCTTC AAAATGAAAA AGGTACTCAT 
AGATTAGTAA GGATTTCACC ATTTAATGCT AATGGTAAAA GACAAACTAG TTTTGCTGGA 
GTTGAGGTAA TGCCTAAATT AGATCAAAGT ATTTCACTAG AGATTCCTGA TAAAGATTTA 
GAAATTACAA CTAGCAGATC AGGTGGGGCT GGAGGACAAA ACGTGAATAA AGTAGAAACA 
GCAGTAAGGA TTTTACATTT ACCCTCGGGA ATCGCTGTAA GATGTACTCA AGAAAGATCT 
CAGTTACAAA ACAAAGAGAA AGCAATGTTA TTGCTTAAAG CTAAATTATT AGTAATAGCT 
AAAGAACAAA GAGCAGCTGA AATATCTGAT ATTAAAGGTG ATATTGTTGA AGCTGCATGG 
GGTAATCAAA TTAGGAATTA TGTTTTTCAT CCTTACCAAA TGGTTAAAGA TTTAAGAACT 
ATGAAAGAGA CTAATGATTT AGATGGTGTT CTTAATGGGG GATTAGATCA ATTTATTCAT 
GAATTATTAC GCATGAATAT TTCTTCTAAA GAATCTGTTC AATAA 

 

Protein sequence

MLRIVFDVPS LVAKRKELEQ IAAEPDFWIN QAAAKKHMLN LDDVRDQLQL LDKWKILIAD 
AEASLELYSL DPEEEMIVES HLGLVTLREN LDKWEFQRLL SGEYDKESAI VSINAGAGGT 
DAQDWVEILL RMYSRWADNN GMSLEITDLS NGEEAGIKSV TFEVNGKYAY GYLQNEKGTH 
RLVRISPFNA NGKRQTSFAG VEVMPKLDQS ISLEIPDKDL EITTSRSGGA GGQNVNKVET 
AVRILHLPSG IAVRCTQERS QLQNKEKAML LLKAKLLVIA KEQRAAEISD IKGDIVEAAW 
GNQIRNYVFH PYQMVKDLRT MKETNDLDGV LNGGLDQFIH ELLRMNISSK ESVQ