| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_01771 |
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| Symbol | ndhF |
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| ID | 4720313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 162092 |
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| End bp | 164128 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640079840 |
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| Product | NAD(P)H-quinone oxidoreductase subunit F |
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| Protein accession | YP_001010493 |
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| Protein GI | 123965412 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.473718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCAAG CTTCAGAAAT TGCCTGGTTA ATTCCTGTCT TTCCGCTTAT TGGAGCGGTA
CTTTCCGGCT TGGGTTTAAT TTGTGCAAAT AAAAAAATCA ATAATTCTAG AGAAATTGTT
GCCATCAGTC TTTTGTCATT CGTAGGTGTT TCTGCGGTAA TTAGTTATAA AACATTAATT
GAGCAAATAA AAGGTTACCA CTCAGTAGAA AAATTATTTG TTTGGGCAAG TGCCGGAGAC
TTCACAATAC CAATGGGATT TGTTCTAGAC CCATTAGGTA GCGTAATGCT TACTTTGGTA
ACCACTATCA CTTTATTAGT CATGATTTAC TCTCATGGTT ATATGGCGCA TGATAAAGGT
TACGTAAGAT TTTTCACGTA TTTAGCCCTC TTCAGTAGTT CGATGATGGG TTTAATTATT
AGCCCAAACT TGTTAGAAAT ATATGTTTTT TGGGAATTAG TAGGAATGTG TTCTTATTTA
TTAGTTGGTT TTTGGTACGA CAGAGATGGC GCAGCTAATG CTGCTCAAAA AGCATTTGTC
GTAAATAGAG TTGGAGACTT TGGATTATTA CTAGGAATTT TGGGTCTTTT TTGGGCTACT
AAAAGCTTTG ATTTTACTGA AATTGCCCTA GGAGTATCAC AATCAGTTTC AGAGAATTCA
TTACCTGTCT GGGCTGCATT ATTACTATGC TTTTTAGTCT TTTTAGGACC TATGGCAAAA
TCTGCTCAGT TTCCTCTTCA TGTATGGCTT CCTGATGCTA TGGAGGGACC AACTCCTATT
TCAGCGCTTA TTCATGCGGC GACGATGGTT GCTGCTGGAA TATTCTTAGT AGCTAGGCTT
CAACCTCTCT ACTCATTATT CCCCTCAATT CAATTCATTA TTGCTTTAGT TGGCACTATT
ACATGTTTCT TAGGGGCATC TATTGCTTTA ACTCAAATGG ATCTAAAAAA GGGTTTGGCA
TACAGTACTG TTTCTCAACT AGGGTATATG ATGCTTGCGA TGGGTTGTGG TGCACCAGTA
GCCGGTATTT TTCACTTGAT AACACATGCT TGCTTCAAAG CAATGTTATT TTTGGGGTCT
GGTTCAGTAA TTCATGCTAT GGAAGAAGTG GTTGGTCATC AACCTGTACT GGCCCAAGAT
ATGAGGTTGA TGGGAGGTTT AAGAAAGAAA ATGCCTTTTA CTTCTACAAC TTTCTTAATA
GGTTGTGTAG CAATAAGTGG TATTCCTCCA TTAGCTGGAT TTTGGAGTAA AGATGAAATA
TTGGGAAACG CTTTTATCTC ATTTCCAGCT TTTTGGTTTG TTGGATTTTT AACAGCAGGA
ATGACAGCTT TCTATATGTT TAGACTTTAT TTCTTAACTT TTGAAGGCGA ATTCAGAGGG
GAAAATAAGG AATTACAAAA AGAACTTTTA CTCGCTGCTG AAATCAATAT AGAAGAAGAA
CAACAACATG AAGAAGAACA ACAACATGAA GAAGAACATG GTTCACTACA TGAGTCTCCT
TGGTCTATGA CTTTTCCACT GGTTTTTCTG GCAGTACCCT CAGTAATAAT TGGGTTTATG
GGATTCCCTT GGGATAGTAA ATTTGCAAAT TTACTAGATC CCGAAGAGGC ATTGATGGCT
ATAGAGTCTT TTGAATTAAA AGAATTTTTA CCTCTTGCTC TTGCGTCTGT TTTTATTGCC
TCGATAGGAA TTACTATCGC TTATCAAGCA TATTTTGCTA AGAAGATTAA TTTATCAATA
TTATTTGCAC AGAGATTTCC CTCTGTTAAT AAGTTTTTAG CAAAAAAATG GTATTTGGAC
GATATTAATG AAAAACTTTT TGTCAAAGGT AGTAGAAAAC TTGCAAAAGA AGTTTTAGAA
GTTGATTCCA AAGTTGTTGA TGGAGTTGTA AATCTTACTG GACTTGTAAC ATTGGGAAGT
GGAGAGGGCC TCAAGTATTT TGAAACAGGA AGAGCTCAAT TTTATGCCTT GATAGTTTTT
GGAGGAGTAA TTTTGTTAGT AGCAATATTT GGTTTCCAAT CACCCCAAAT AACTTAA
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| Protein sequence | MPQASEIAWL IPVFPLIGAV LSGLGLICAN KKINNSREIV AISLLSFVGV SAVISYKTLI
EQIKGYHSVE KLFVWASAGD FTIPMGFVLD PLGSVMLTLV TTITLLVMIY SHGYMAHDKG
YVRFFTYLAL FSSSMMGLII SPNLLEIYVF WELVGMCSYL LVGFWYDRDG AANAAQKAFV
VNRVGDFGLL LGILGLFWAT KSFDFTEIAL GVSQSVSENS LPVWAALLLC FLVFLGPMAK
SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGIFLVARL QPLYSLFPSI QFIIALVGTI
TCFLGASIAL TQMDLKKGLA YSTVSQLGYM MLAMGCGAPV AGIFHLITHA CFKAMLFLGS
GSVIHAMEEV VGHQPVLAQD MRLMGGLRKK MPFTSTTFLI GCVAISGIPP LAGFWSKDEI
LGNAFISFPA FWFVGFLTAG MTAFYMFRLY FLTFEGEFRG ENKELQKELL LAAEINIEEE
QQHEEEQQHE EEHGSLHESP WSMTFPLVFL AVPSVIIGFM GFPWDSKFAN LLDPEEALMA
IESFELKEFL PLALASVFIA SIGITIAYQA YFAKKINLSI LFAQRFPSVN KFLAKKWYLD
DINEKLFVKG SRKLAKEVLE VDSKVVDGVV NLTGLVTLGS GEGLKYFETG RAQFYALIVF
GGVILLVAIF GFQSPQIT
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