| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_01691 |
|---|
| Symbol | |
|---|
| ID | 4720305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | + |
|---|
| Start bp | 155163 |
|---|
| End bp | 156410 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 640079832 |
|---|
| Product | poly A polymerase family protein |
|---|
| Protein accession | YP_001010485 |
|---|
| Protein GI | 123965404 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATGC ACATAATCAA AGAAGAGAAT CTTAAAAATC ATATTTTCAT TGATCATACA
CTAATAATTA ATGAAATAGA AAGAAGTATA AAATTTTATA ATTGGGAATT TATTTTATCT
TTTTTACCTT CAGGATCTTA TCTGGTCGGG GGATATATAA GAGATTTAAT TTTAGGGAGA
TTAAACTCAT TGATTGATGT TGATATTGTA GTTCCAAAAA ATGCTATTAA GATTGGAAAA
AAAATTGCGG ATAAATTTGA AGGTAAATTT ATTATTCTTG ATGAAGCACG TGATGTCGTA
AGACTTATTT TTAAACATGT TTCAGTTGAT ATTGCATCTC AAATTTCTCC TTCTATTGAA
ATTGATTTAT TCAGTCGAGA TTTTTCTATA AACGCTATTG CTTTTTCTTT TGATAAGAAA
TTACTAATTG ATCCATCAAA TGGAATTAAA GATCTACAGC TCTCTTTATT AAGAACTCAC
TCAAAACAGA ATTTATTGGA GGATCCATTA AGAATTTTAA GATGCTTTCG TTTTGTTTCT
GAGTTGAATT TTAATGTTGA TGTGAATTTA ATAAATGTTA TTAAAACTTG TAAAAATAAA
TTAAGTCTGA TTGCTTCTGA AAGGATTAAT TATGAAATCC AGCGAATAAT AATAGGTAGT
GAGGCAGCTT ATGCAATTAA ATTAATAAAT AAATTTAAAA TTTTTGATTA CCTACAGTCT
GAAAAAAATT TGATATTTAT TGATTTACAA AAAATTAATT TTGAAGCATT TTCTAAAATT
GAAAAAGATA AATTCTTTCC TTTATTTTTT CTTTCCCAGA TTTTAGATGA ATTTTCTCTA
AAAATTTTAA AATTTAGAAA ATCTGAAATT GCAAAAATTA GGTTATTAAG AAAATGGAAT
CTATTATTAA AGAGAAAAAC TATTTATGAA TTAGATGAAA GAGAAAGATT TAATTTACAT
CAAGAATTAG AGAACATTCT TCCTTCTTTT ATTCTTTTCT TGCAAGAATC ATTTTATATA
GATTGGCTCG AAAGATGGAG AAATAAAGAT GATAAATTAT TTCATCCATC AAACTTAATA
AAAGGGACAG TTTTGAAAAA ATATTTAAAA ATCCAGGAGG GACCTGTTTT AGGAAAGGTC
ATGAATTATC TTTCTATGGA GCTTGCATTT AATAGATTGA ATAATTTTGA TGAAGCAATT
TATAAAGGAA AGCAATGGAT TCAACAAAAT GCGCCAAAAT GTGATTAA
|
|---|
| Protein sequence | MQMHIIKEEN LKNHIFIDHT LIINEIERSI KFYNWEFILS FLPSGSYLVG GYIRDLILGR
LNSLIDVDIV VPKNAIKIGK KIADKFEGKF IILDEARDVV RLIFKHVSVD IASQISPSIE
IDLFSRDFSI NAIAFSFDKK LLIDPSNGIK DLQLSLLRTH SKQNLLEDPL RILRCFRFVS
ELNFNVDVNL INVIKTCKNK LSLIASERIN YEIQRIIIGS EAAYAIKLIN KFKIFDYLQS
EKNLIFIDLQ KINFEAFSKI EKDKFFPLFF LSQILDEFSL KILKFRKSEI AKIRLLRKWN
LLLKRKTIYE LDERERFNLH QELENILPSF ILFLQESFYI DWLERWRNKD DKLFHPSNLI
KGTVLKKYLK IQEGPVLGKV MNYLSMELAF NRLNNFDEAI YKGKQWIQQN APKCD
|
|---|
| |