Gene P9515_01601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_01601 
Symbol 
ID4720296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp147489 
End bp148010 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content30% 
IMG OID640079823 
Productphotosystem I assembly protein Ycf3 
Protein accessionYP_001010476 
Protein GI123965395 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.487254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAAATA ATCAAAACAG AGACAATTTT ATAGATAAAG CTTTTACTGT AATTGCTGAA 
TCTATTGTCA AAATCATGCC AATTGCTGAT AAAGAAAAAA AAGCTTACAT CTATTATCGA
GATGGTTTAG CTGCGCAAAA TAATGGCGAT TATTCAGAAG CATTGGAATA CTATAAAGAG
AGCTTATTAT TAGAAGAAAA TAAAATTGAT AGAGGAGAAA CTTTAAAAAA TATGGCAATA
ATATATATGA GTAATGGAGA AGAGGATTTA TCCATAGAAA CTTATCAAAA AGCTTTAGTT
GAAAATCCTA AACAGCCATC TTGTCTTAAA AACATAGGAT TGATTTATGA AAAAAGGGGA
AGATATGCTG AACAGAATGG TGACTTAGAT CAAAGAGATA TGTGGTTTGA TAAAGCTGCT
CAAGTTTGGT CTAAAGCTGT GAGGCTTTAT CCTGGTGGAT ATTTAGATAT TGAAAATTGG
TTAAAAACTT CTGGAAGAAG TTCAATTGAT ATTTATCTTT AG
 
Protein sequence
MPNNQNRDNF IDKAFTVIAE SIVKIMPIAD KEKKAYIYYR DGLAAQNNGD YSEALEYYKE 
SLLLEENKID RGETLKNMAI IYMSNGEEDL SIETYQKALV ENPKQPSCLK NIGLIYEKRG
RYAEQNGDLD QRDMWFDKAA QVWSKAVRLY PGGYLDIENW LKTSGRSSID IYL