Gene P9515_01571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_01571 
SymbolholB 
ID4720293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand- 
Start bp143476 
End bp144435 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content26% 
IMG OID640079820 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_001010473 
Protein GI123965392 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.499348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATC TTGAAAATGA TAATCTTTTG ATTAATAAAG AAGTCAATCA AATTTTAGAA 
AATATACTTC AAACAAAAGT ATTTTCTAAC GGTTATATTT TTTATGGCCC TGAAGGTATT 
GGAAAAAAAC AAACAGCTAT TGAATTTATT AAAGAAATTT TTATTCAAGA TTCTTCTAAT 
TCAAATATTC AAGAAAAAAT TATAGATAAT AACCATCCAG ATTTTTTATT AATAGAGCCA 
ACATATGTTT TCAAGGGTAA TCTTATAAAT AGTTCAGAAG CCGATTCTTC AAAAAACAAA 
AAAGCAACAA TAAGAATTGA GCAAATAAGG AATATAAAAA ATTTTTTGGC TCAAAAATCT 
ATTGAATCAG GAAAAAAGAT TGTCTTAATT ATTGATGCAG ACCTTTTAAA TGAAGCTGCA 
TCCAATTGCC TTTTAAAAAC ACTTGAAGAG CCCACTAATG GTCTGTTTAT TCTTTTAACA 
TCAAGATTAA GTTCACTTTT AGGTACTATT ATCTCAAGAT GTCAACTCAT TAGATTTAAA 
TCTTTTTCAT ACAAACAACT TGAGATTTTT ATAAAAAATA ATACAGATGA TTCAATATTA 
AACAATGAAG AAAAAGTGAA TTTAGAAGAT TTAATTTATT CAGCGAATGG CTCTCCAGGG 
AAAATACTGA AAAATATAAA AATGTGGAAC GAATTACCTA ACGAGATAAA AGATAATTTA 
AGCTTCCCAT TGATGAATAA TCTAGAAATA CTAAAAGTTT CAAAAATAAT TGCTGAGGAA 
CTAGTGTTAG ATCAACAGAT ATTCTTAGTA AACCTTATGC AAAAAAAATG TTGGGAAACA 
GCTAAAAATA AAAAGATAAT TAAAACATTA GAAAAATTGA AAATTCATCT CATGAATTTT 
ACCCAACCAA GGCTAGCTTG GGAAGTGAGC TTATTAAAAA TAGCTAATGA AGATTTATAA
 
Protein sequence
MINLENDNLL INKEVNQILE NILQTKVFSN GYIFYGPEGI GKKQTAIEFI KEIFIQDSSN 
SNIQEKIIDN NHPDFLLIEP TYVFKGNLIN SSEADSSKNK KATIRIEQIR NIKNFLAQKS 
IESGKKIVLI IDADLLNEAA SNCLLKTLEE PTNGLFILLT SRLSSLLGTI ISRCQLIRFK 
SFSYKQLEIF IKNNTDDSIL NNEEKVNLED LIYSANGSPG KILKNIKMWN ELPNEIKDNL 
SFPLMNNLEI LKVSKIIAEE LVLDQQIFLV NLMQKKCWET AKNKKIIKTL EKLKIHLMNF 
TQPRLAWEVS LLKIANEDL