Gene P9515_01201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_01201 
SymbolaroK 
ID4720255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp120411 
End bp120968 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content28% 
IMG OID640079782 
Productshikimate kinase 
Protein accessionYP_001010436 
Protein GI123965355 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAT CGATTATTGA TAAAACAAAC AAAATAATTA AAGGAAGAAG TATATTTTTG 
ATAGGTATGA TGGCTAGTGG TAAATCTCAA ACTGGCCCAG TATTAGCTAA ATTTTTGAGG
TACAAATATA TTGATTTAGA TAAATTAATA GAGAAAATCG TAAAAAAAAC AATTATTGAA
ATGTTCCACG AAGATGGTGA AGAAAAATTT CGAGAACTAG AGACAAATTG CTTAAAAGAA
ACAATCAAAA TTCCCTCTTT AGTAATATCT ACTGGTGGAG GTGTTATTGC TAAACCAGAA
AACTGGGGAA TATTAAGGCA AGGTATTATA ATTTGGATTG ATACAAAGCA AGAGATTGCT
CTTGAGAGAC TGCAAAATGA TATTGATAAT AGACCTTTAC TTCAAGGAAA AGATTTAAAA
GAATTATATA GTCGTATTTT TCAATCAAGA AAAAATTTAT ATTCGCAGGC TGACTTAAGA
GTTGAGGTTG ATAACGAAAA CGTTGAAGAA GTTGCAAAAA AAATAATTTA TCAAATTCAT
AACAAAATTA TTAATTAA
 
Protein sequence
MEKSIIDKTN KIIKGRSIFL IGMMASGKSQ TGPVLAKFLR YKYIDLDKLI EKIVKKTIIE 
MFHEDGEEKF RELETNCLKE TIKIPSLVIS TGGGVIAKPE NWGILRQGII IWIDTKQEIA
LERLQNDIDN RPLLQGKDLK ELYSRIFQSR KNLYSQADLR VEVDNENVEE VAKKIIYQIH
NKIIN