| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_01121 |
|---|
| Symbol | nadB |
|---|
| ID | 4720247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | + |
|---|
| Start bp | 112925 |
|---|
| End bp | 114592 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640079774 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_001010428 |
|---|
| Protein GI | 123965347 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.517709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGGC AACCATTTTC GCAAGAAGCA ATATCTATTG ATAAGTGGGA CGTGATCGTT
ATTGGTGCAG GAGCAGCGGG TTTAATGACT TGTTTGGAAT TGCCAGAAAA TTTAAATGTT
CTTCTTTTAA ATAGAAATAC AAGTAAAAGA TCTTCGAGCA GATGGGCCCA AGGAGGGATT
GCATCAGTAG TAAGACCTGA AGATTCTTTT GCTCTTCATG TAGAAGATAC CTTAAAAGCT
GGAGATGATT TGTGTGATAA ATCTGCAGTT GAAATGCTTG TTAGTGAAGC TCCCGGCTGC
GTTGATAGGT TGCAAAATTT AGGTATGATT TTTGATCAGA GCTCTGATCA ATTGGCAACA
ACTTTAGAAG CTGCCCACTC TTGTAGAAGA GTTTTACATG TTAAAGATCG AACAGGTAGA
GCACTTGTAG AGGTATTAGA AGATCATATC GAAAACAAAG AGAATATTTT GCATTGTAGA
GGTGTGAGAG TAACAGAATT GCTTATTGAA AACCAAGTAT GTACTGGAGT TCAAGTATTA
GATGGATCTA ATTTATATTG GATTACTTCT AAAGCTGTTG TTTTAGCTAC GGGCGGAGGC
GGACACTTAT TTACCAATAC TACAAATCCT GCCCAATCTT CAGGAGAAGG AATTGCTCTC
TCATGGAAAG CTGGAGCTGC AATTGAGGAT TTAGAATTTA TACAATTTCA TCCTACAGCT
TTAAAGTTTT ATGGCTCTCC TTGCTTTTTA ATATCTGAAG CCCTTCGAGG AGAGGGCGCA
GTTCTTGTTG ATAAGAATGG CGAAAGCCCA GTAAGGCATT TACAAAATGG CGATTTGGCA
ACAAGAGACC AAGTTAGTAG AGCAATTATG AATAGTATGC AAGAAAATGA TATTGATCAT
GTTGGCCTAG ATTTAAGATT TATTGATCCA AAAAAAATTG TAGAAAGATT TCCTACAATC
ATTAGTAGAT GTCAAGATTA TGGAGTTAAT CCTTTGACGG AGGTCATTCC TGTTGCGCCG
GCGGCTCATT ATTGGATGGG AGGCGTTCAT ACTGATTTGG ATGCATCTTC TACAGTCAAA
GGCTTATATG CCGTAGGAGA AGTAGCCTCT ACAGGCGTGC ATGGTGCAAA CAGACTAGCT
AGTAATTCGC TGATGGAATG CCTTGTATTC GCACGAAAAT TGTCTTCAAT TGAGTTGAAT
TCTCCTTTCA ACTTGAGAAG GCTAGATAGA CATAATAAGG AAATTTATAT GGATAGTCCA
AAGGAGGATT TTATCTCAAG TATTTCAGAG AAAATTAATA GTTTAAGAAA ATCATGCTGG
TCTCATTTAG GGGTCTCCCG CAATAAAAAA AGTATGATCG AACTATTAAA AATTCTTCAA
GAAGAGAAAG ATGAAATACA AAAAAATCCG TTGCTTGAGT GTCTTAAGAA AATAGAAATT
GATCAGAAAT TGAAATTAAG TGAACCAAAT AGGCGAGCTC TTAATCTATT GCTTGATTTG
AATAATAGAC AAATTACGAC ATTATTATTA TTAAAAGCTT GTCTTTTTCG AGAGGAAAGT
CGAGGTGGGC ATTATAGGGA CGATTATCCT TCTAAAGAAA AAATTTGGGA ATGTCATACT
AGGCAGCAAT TAAATCACAA AATAATTAAA AGGTTTATTA AAAATTAG
|
|---|
| Protein sequence | MLRQPFSQEA ISIDKWDVIV IGAGAAGLMT CLELPENLNV LLLNRNTSKR SSSRWAQGGI
ASVVRPEDSF ALHVEDTLKA GDDLCDKSAV EMLVSEAPGC VDRLQNLGMI FDQSSDQLAT
TLEAAHSCRR VLHVKDRTGR ALVEVLEDHI ENKENILHCR GVRVTELLIE NQVCTGVQVL
DGSNLYWITS KAVVLATGGG GHLFTNTTNP AQSSGEGIAL SWKAGAAIED LEFIQFHPTA
LKFYGSPCFL ISEALRGEGA VLVDKNGESP VRHLQNGDLA TRDQVSRAIM NSMQENDIDH
VGLDLRFIDP KKIVERFPTI ISRCQDYGVN PLTEVIPVAP AAHYWMGGVH TDLDASSTVK
GLYAVGEVAS TGVHGANRLA SNSLMECLVF ARKLSSIELN SPFNLRRLDR HNKEIYMDSP
KEDFISSISE KINSLRKSCW SHLGVSRNKK SMIELLKILQ EEKDEIQKNP LLECLKKIEI
DQKLKLSEPN RRALNLLLDL NNRQITTLLL LKACLFREES RGGHYRDDYP SKEKIWECHT
RQQLNHKIIK RFIKN
|
|---|
| |