Gene P9515_01071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_01071 
Symbolrbn 
ID4720242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp107333 
End bp108277 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content34% 
IMG OID640079769 
Productserum resistance locus BrkB-like protein 
Protein accessionYP_001010423 
Protein GI123965342 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.48623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTGG AGGAGTATTT GAAGAGAATT GATATGCAGC GCAGCTCAAC ATGGATTATT 
AAAAGTTTAT GGGGAGCCTG TGAAAGATGG AGTAAATCAG ATTGTATTGA TTTAAGCGCT
GCTTTTGCAT ATTACACACT TCAGTCATTC TTTCCTATAC TTCTTATTTC TCTTTCAATA
GCTTCTTGGT TTCTAGGCAA ACAAGAAGGC TTAGATCAAG AAATTATATC TATTGCCGCT
CAAATTTTAC CTCCATCCGT TGTTGAATTA GTTGAAACAA CATTATTCAA ATTAATTGAT
CAAGGTTTTG GAGCAGGAAT TTTAGGAGCA ATGTTTTTAC TATTCACTGC AGGCAACGCT
TACTTATCAC TTCAACGAGG TTCAGATAGG CTATGGGAAG ACGAACTGCC TTCTAGGCGA
GTAAACTCTG CGTGGCAAGA GCAAGCCTCA AGATTTCTTA GAAATAGAAT TGAAGCTTTC
TTGATAGTGT TTTTTGTAGG TTTTTTAATG GTATTAGATC AAATAAGTGC AAATCTCAGA
ATGATTCCCA CAACAGTTTT AGAAAACTTA TCAAAGTCTA GTAATATTTT TTCTGATTTA
TTTATGAAAT TACCACTCTT ACAAGTTGGC AAATTTGCTT TTCCACTTAT AGGATTTTCA
TTAATGGCTC TGTTACTTCA AGCTCTTTTA CCAAGTAGAA AAGTTCCTTT AAAACCATTA
ATTCCTGGTT CCATACTAAT TGGAATTGGT CTGACAACTC TTAATCTTGC AGTTAGTAAA
AGTATTCTTT CCCTTGGAGT GAGATTTCAG GCATATGGTT TTATTGGAGG ATTTTTAGTA
CTAACTTTAT GGGTATGGCT ATTAGGAGTT ATTTTATATT TTGGACAATG CTGGAGCGTT
GTTATAGCAA GTATGAGTTT AATAAATAGA AGGAGAAATA AGTAA
 
Protein sequence
MILEEYLKRI DMQRSSTWII KSLWGACERW SKSDCIDLSA AFAYYTLQSF FPILLISLSI 
ASWFLGKQEG LDQEIISIAA QILPPSVVEL VETTLFKLID QGFGAGILGA MFLLFTAGNA
YLSLQRGSDR LWEDELPSRR VNSAWQEQAS RFLRNRIEAF LIVFFVGFLM VLDQISANLR
MIPTTVLENL SKSSNIFSDL FMKLPLLQVG KFAFPLIGFS LMALLLQALL PSRKVPLKPL
IPGSILIGIG LTTLNLAVSK SILSLGVRFQ AYGFIGGFLV LTLWVWLLGV ILYFGQCWSV
VIASMSLINR RRNK